Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Gm25239-201ENSMUST00000174915 86 ntBASIC32.77■■■□□ 2.84
Traf4Q61382 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Traf4Q61382 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Traf4Q61382 Gm15042-201ENSMUST00000120212 883 ntBASIC28.59■■■□□ 2.17
Traf4Q61382 Gm24109-201ENSMUST00000175489 103 ntBASIC28.41■■■□□ 2.14
Traf4Q61382 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Traf4Q61382 Gm15045-201ENSMUST00000117359 883 ntBASIC27.93■■■□□ 2.06
Traf4Q61382 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Traf4Q61382 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Traf4Q61382 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Traf4Q61382 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Traf4Q61382 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Traf4Q61382 Gm23366-201ENSMUST00000175022 89 ntBASIC27.38■■□□□ 1.97
Traf4Q61382 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Traf4Q61382 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Traf4Q61382 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
Traf4Q61382 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Traf4Q61382 Psd-208ENSMUST00000224556 2034 ntBASIC26.53■■□□□ 1.84
Traf4Q61382 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.52■■□□□ 1.84
Traf4Q61382 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Traf4Q61382 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.32■■□□□ 1.8
Traf4Q61382 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Traf4Q61382 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Traf4Q61382 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
Traf4Q61382 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.22■■□□□ 1.79
Traf4Q61382 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Traf4Q61382 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Traf4Q61382 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Traf4Q61382 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Traf4Q61382 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Traf4Q61382 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.9■■□□□ 1.74
Traf4Q61382 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Traf4Q61382 Gm25238-201ENSMUST00000174914 89 ntBASIC25.88■■□□□ 1.73
Traf4Q61382 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Traf4Q61382 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Traf4Q61382 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Traf4Q61382 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.73■■□□□ 1.71
Traf4Q61382 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Traf4Q61382 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Traf4Q61382 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Traf4Q61382 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Traf4Q61382 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Traf4Q61382 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Traf4Q61382 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Traf4Q61382 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
Traf4Q61382 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Traf4Q61382 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Traf4Q61382 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Traf4Q61382 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.23■■□□□ 1.63
Traf4Q61382 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Traf4Q61382 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.22■■□□□ 1.63
Traf4Q61382 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Traf4Q61382 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Traf4Q61382 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.1■■□□□ 1.61
Traf4Q61382 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Traf4Q61382 Gm27325-201ENSMUST00000175467 74 ntBASIC25.04■■□□□ 1.6
Traf4Q61382 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Traf4Q61382 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Traf4Q61382 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.93■■□□□ 1.58
Traf4Q61382 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Traf4Q61382 Gm25262-201ENSMUST00000174934 133 ntBASIC24.84■■□□□ 1.57
Traf4Q61382 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Traf4Q61382 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.78■■□□□ 1.56
Traf4Q61382 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.74■■□□□ 1.55
Traf4Q61382 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Traf4Q61382 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Traf4Q61382 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Traf4Q61382 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Traf4Q61382 Rab21-202ENSMUST00000218831 843 ntBASIC24.64■■□□□ 1.54
Traf4Q61382 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.63■■□□□ 1.53
Traf4Q61382 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.57■■□□□ 1.52
Traf4Q61382 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.54■■□□□ 1.52
Traf4Q61382 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Traf4Q61382 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Traf4Q61382 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Traf4Q61382 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.47■■□□□ 1.51
Traf4Q61382 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Traf4Q61382 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Traf4Q61382 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Traf4Q61382 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Traf4Q61382 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.37■■□□□ 1.49
Traf4Q61382 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
Traf4Q61382 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
Traf4Q61382 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Traf4Q61382 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Traf4Q61382 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.3■■□□□ 1.48
Traf4Q61382 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Traf4Q61382 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.28■■□□□ 1.48
Traf4Q61382 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.27■■□□□ 1.48
Traf4Q61382 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Traf4Q61382 Gm26115-201ENSMUST00000175605 87 ntBASIC24.25■■□□□ 1.47
Traf4Q61382 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Traf4Q61382 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Traf4Q61382 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Traf4Q61382 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Traf4Q61382 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Traf4Q61382 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Traf4Q61382 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Traf4Q61382 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Traf4Q61382 Gm8109-201ENSMUST00000194076 746 ntBASIC24.09■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms