RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Foxl2O88470 375 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 PpiaP17742 164 aaKnown RBP8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Slc6a9P28571 692 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ccr2P51683 373 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Nhlh1Q02576 133 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Foxl1Q64731 336 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm5771Q792Y9 245 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1290Q7TQX8 312 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mrps10Q80ZK0 160 aaKnown RBP8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 EogtQ8BYW9 527 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Slc24a5Q8C261 501 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Nadk2Q8C5H8 452 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r233Q8R294 319 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1141Q8VFQ7 311 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1230Q8VG58 305 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Phf19Q9CXG9 578 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr945Q9EQB5 319 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Kcnip1Q9JJ57 227 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm4175D3YTW8 314 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r34G3XA52 309 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r114L7N226 321 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r126L7N2C8 321 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tnfsf8P32972 239 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 CortP56469 109 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Pip5k1aP70182 546 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Dlx4P70436 240 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Htr2bQ02152 479 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Npy1rQ04573 382 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rtp3Q5QGU6 474 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Trav8d-2Q5R1B6 112 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr141Q60880 325 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Slc46a1Q6PEM8 459 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Q8BTG6 205 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 D330020A13RikQ8C799 211 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr720Q8VF37 316 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1260Q8VGN9 310 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tmem19Q91W52 336 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Loxl4Q924C6 757 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ccdc198Q9CPZ1 294 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mrpl30Q9D7N6 160 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tmem239Q9DA47 151 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Klk4Q9Z0M1 255 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Col5a1O88207 1838 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr418A0A140T8J6 310 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr739E9Q1P0 309 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Gm14408E9Q6B9 136 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Pira2F8VQ94 680 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 TcapO70548 167 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Nkpd1Q0VF94 599 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Klk1b24Q61754 263 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Fam234aQ8C0Z1 555 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Nkg7Q99PA5 165 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Mettl21AQ9CQL0 218 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Smdt1Q9DB10 107 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 PyyQ9EPS2 98 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Ascl3Q9JJR7 174 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Tanc2A2A690 1994 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Ighv1-34A0A075B5V2 117 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Amy2a1E9PV85 245 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 A630023A22RikJ3QP60 199 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Gm20821J3QPJ2 227 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Tff1Q08423 87 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Gm5615Q3UW02 101 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Zfp948Q6DFU8 667 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Prss54Q7M756 383 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Pgam5Q8BX10 288 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Acaa1bQ8VCH0 424 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr1054Q8VGS7 312 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 MrgprdQ91ZB8 321 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Acaa1aQ921H8 424 aaKnown RBP8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Polr3kQ9CQZ7 108 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Ms4a4bQ9ES61 226 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr154Q9QY00 318 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Slc25a10Q9QZD8 287 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Trav6d-5A0A075B6B9 112 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 OdamA1E960 273 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 AsmtD3KU66 387 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 LalbaP29752 143 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Rab19P35294 217 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Tubg1P83887 451 aaKnown RBP8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 PjvkQ0ZLH2 352 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Zdhhc23Q5Y5T3 425 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Cfhr1Q61406 343 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr1394Q8VET2 312 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Slc25a2Q99ML6 265 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Efcab10Q9D581 132 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Rarres2Q9DD06 162 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Nek7Q9ES74 302 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Pex14Q9R0A0 376 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Usf3B2RUQ2 2221 aa8.33□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Eml6Q5SQM0 1958 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Kdf1A2A9F4 397 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr1097A2AVA9 315 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Gm17333C6EQI3 125 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr556E9Q549 324 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 SrcP05480 541 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 SgcbP82349 320 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Cdk2P97377 346 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Msl2Q69ZF8 577 aa8.32□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 OpalinQ7M750 143 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms