Protein–RNA interactions for Protein: Q8R294

Vmn1r233, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r233Q8R294 Gm25239-201ENSMUST00000174915 86 ntBASIC31.31■■■□□ 2.6
Vmn1r233Q8R294 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Vmn1r233Q8R294 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Vmn1r233Q8R294 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Vmn1r233Q8R294 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Vmn1r233Q8R294 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Vmn1r233Q8R294 Gm15042-201ENSMUST00000120212 883 ntBASIC27.86■■■□□ 2.05
Vmn1r233Q8R294 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Vmn1r233Q8R294 Gm15045-201ENSMUST00000117359 883 ntBASIC27.31■■□□□ 1.96
Vmn1r233Q8R294 Psd-208ENSMUST00000224556 2034 ntBASIC27.31■■□□□ 1.96
Vmn1r233Q8R294 Gm24109-201ENSMUST00000175489 103 ntBASIC26.9■■□□□ 1.9
Vmn1r233Q8R294 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Vmn1r233Q8R294 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Vmn1r233Q8R294 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Vmn1r233Q8R294 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.83■■□□□ 1.89
Vmn1r233Q8R294 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Vmn1r233Q8R294 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Vmn1r233Q8R294 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vmn1r233Q8R294 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Vmn1r233Q8R294 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Vmn1r233Q8R294 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Vmn1r233Q8R294 Gm23366-201ENSMUST00000175022 89 ntBASIC26.26■■□□□ 1.79
Vmn1r233Q8R294 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Vmn1r233Q8R294 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r233Q8R294 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Vmn1r233Q8R294 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vmn1r233Q8R294 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.13■■□□□ 1.77
Vmn1r233Q8R294 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Vmn1r233Q8R294 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Vmn1r233Q8R294 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Vmn1r233Q8R294 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Vmn1r233Q8R294 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.88■■□□□ 1.73
Vmn1r233Q8R294 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Vmn1r233Q8R294 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Vmn1r233Q8R294 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Vmn1r233Q8R294 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Vmn1r233Q8R294 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Vmn1r233Q8R294 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.57■■□□□ 1.68
Vmn1r233Q8R294 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Vmn1r233Q8R294 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.44■■□□□ 1.66
Vmn1r233Q8R294 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Vmn1r233Q8R294 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Vmn1r233Q8R294 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.17■■□□□ 1.62
Vmn1r233Q8R294 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.17■■□□□ 1.62
Vmn1r233Q8R294 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vmn1r233Q8R294 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Vmn1r233Q8R294 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Vmn1r233Q8R294 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vmn1r233Q8R294 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Vmn1r233Q8R294 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vmn1r233Q8R294 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vmn1r233Q8R294 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.83■■□□□ 1.57
Vmn1r233Q8R294 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
Vmn1r233Q8R294 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vmn1r233Q8R294 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vmn1r233Q8R294 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Vmn1r233Q8R294 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Vmn1r233Q8R294 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vmn1r233Q8R294 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.64■■□□□ 1.53
Vmn1r233Q8R294 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Vmn1r233Q8R294 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
Vmn1r233Q8R294 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
Vmn1r233Q8R294 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Vmn1r233Q8R294 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Vmn1r233Q8R294 Gm25238-201ENSMUST00000174914 89 ntBASIC24.54■■□□□ 1.52
Vmn1r233Q8R294 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vmn1r233Q8R294 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.53■■□□□ 1.52
Vmn1r233Q8R294 Gm27325-201ENSMUST00000175467 74 ntBASIC24.51■■□□□ 1.51
Vmn1r233Q8R294 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.49■■□□□ 1.51
Vmn1r233Q8R294 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.49■■□□□ 1.51
Vmn1r233Q8R294 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Vmn1r233Q8R294 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Vmn1r233Q8R294 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.32■■□□□ 1.48
Vmn1r233Q8R294 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.3■■□□□ 1.48
Vmn1r233Q8R294 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Vmn1r233Q8R294 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Vmn1r233Q8R294 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
Vmn1r233Q8R294 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r233Q8R294 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r233Q8R294 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Vmn1r233Q8R294 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vmn1r233Q8R294 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Vmn1r233Q8R294 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vmn1r233Q8R294 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r233Q8R294 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Vmn1r233Q8R294 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Vmn1r233Q8R294 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Vmn1r233Q8R294 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vmn1r233Q8R294 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24■■□□□ 1.43
Vmn1r233Q8R294 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.98■■□□□ 1.43
Vmn1r233Q8R294 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Vmn1r233Q8R294 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.96■■□□□ 1.43
Vmn1r233Q8R294 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r233Q8R294 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vmn1r233Q8R294 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vmn1r233Q8R294 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r233Q8R294 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Vmn1r233Q8R294 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vmn1r233Q8R294 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vmn1r233Q8R294 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms