RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Vmn2r108E9PYS0 855 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Pwwp2bE9Q9M8 600 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Dvl1P51141 695 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 StumQ0VBF8 141 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 PjvkQ0ZLH2 352 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmem106bQ80X71 275 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mob1bQ8BPB0 216 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Dnttip1Q99LB0 328 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Kcnmb2Q9CZM9 235 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Naa60Q9DBU2 242 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ighv5-9A0A075B5Q2 117 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ear14F6YUX7 155 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rnase2O35291 155 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cxcl1P12850 96 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Spi1P17433 272 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 SlbpP97440 275 aaKnown RBP7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 SelenohQ3UQA7 116 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Zc4h2Q68FG0 224 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1058Q7TR74 316 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr504Q7TRU7 318 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r35Q8R2E2 296 aa7.24□□□□□ -1.25
Trim39-201ENSMUST00000042717 Trav5-4A0A075B652 114 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Trbv15A0A0A6YYE3 115 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm15440D3Z3P4 90 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Igsf6P0C6B7 237 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Wnt2P21552 360 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rps2P25444 293 aaKnown RBP7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 LoxP28301 411 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 AhrP30561 848 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rab3dP35276 219 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Efnb2P52800 336 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 OsmP53347 263 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Slc7a15Q50E62 488 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ewsr1Q61545 655 aaKnown RBP7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr921Q7TRC0 313 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 C1qtnf4Q8R066 326 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr470Q8VF65 314 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fam3bQ9D309 235 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Stra6lQ9DBN1 621 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ergic1Q9DC16 290 aaKnown RBP7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Wdr4Q9EP82 413 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Wisp2Q9Z0G4 251 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sdk1Q3UH53 2193 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Svep1A2AVA0 3567 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Sult2a4L7N245 285 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Mesp2O08574 370 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 KrasP32883 189 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tnfsf8P32972 239 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 P58686 83 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rap2bP61226 183 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1362Q5SZZ8 308 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1141Q8VFQ7 311 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr979Q8VH10 311 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cst14Q8VII3 130 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 B3galnt1Q920V1 331 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Lcn8Q924P3 175 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fxyd6Q9D164 94 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Nek7Q9ES74 302 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Ccl8Q9Z121 97 aa7.23□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rhox7aA2A4F1 281 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Vmn1r224E9PWK2 298 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm2381G3UY53 305 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm3486L7N2D0 199 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 P18529 117 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 FauP35545 74 aaKnown RBP7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 FblP35550 327 aaKnown RBP7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tff1Q08423 87 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tgfbr2Q62312 592 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Fam222bQ6P539 562 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmem204Q7TQI0 226 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Tmprss11fQ8BHM9 439 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cbln4Q8BME9 198 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Prss35Q8C0F9 409 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Hspa12aQ8K0U4 675 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Hoxc12Q8K5B8 280 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 0610009B22RikQ8R3W2 140 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Plppr2Q8VCY8 343 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1241Q8VF91 314 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1151Q8VFQ8 308 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1462Q8VFW3 307 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Eva1aQ91WM6 156 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Prss41Q920S2 322 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rnf115Q9D0C1 305 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rab1bQ9D1G1 201 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gng12Q9DAS9 72 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Prss21Q9JHJ7 324 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Calm4Q9JM83 148 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm21488A0A087WR99 222 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm21497A0A087WRK3 222 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Gm29866A0A0A6YX04 222 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr753-ps1A0A140LHN3 164 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr1274-psA0A1L1SQ02 309 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Cdc20bD3Z3I0 519 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 A930017K11RikE0CXQ2 571 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr635K7N6B1 321 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 B4galt1P15535 399 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Lyz1P17897 148 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Rpl31P62900 125 aaKnown RBP7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 SgcaP82350 387 aa7.22□□□□□ -1.25
Trim39-201ENSMUST00000042717 Olfr923Q7TRB9 317 aa7.22□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms