RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 UBQLN2Q9UHD9 624 aa8.09□□□□□ -1.11
FOXCUT-201ENST00000628509 VPREB3Q9UKI3 123 aa8.09□□□□□ -1.11
FOXCUT-201ENST00000628509 IGSF23A1L1A6 192 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 MSGN1A6NI15 193 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 NPIPB5A8MRT5 1133 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 CST7O76096 145 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 OPN1MWP04001 364 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 OPN1MW2P0DN77 364 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 OPN1MW3P0DN78 364 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 SRD5A1P18405 259 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 CD24P25063 80 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 S100A7P31151 101 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 PAX9P55771 341 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 CX3CL1P78423 397 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 NHLH2Q02577 135 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 LAMTOR1Q6IAA8 161 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 CIARTQ8N365 385 aaPredicted RBP8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 C5orf56Q8N8D9 126 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 SGMS2Q8NHU3 365 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 C17orf50Q8WW18 174 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 PRSS22Q9GZN4 317 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 NPVFQ9HCQ7 196 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 PLSCR3Q9NRY6 295 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 ZNF580Q9UK33 172 aa8.08□□□□□ -1.12
FOXCUT-201ENST00000628509 UMAD1C9J7I0 102 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 TEX46H3BTG2 121 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 H3BUA1 57 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 AP4M1O00189 453 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 MBP02144 154 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 CRYBA1P05813 215 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 SEC11BP0C7V7 166 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 CNTFRP26992 372 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 RAB2AP61019 212 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 SLC35B1P78383 322 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 SERF2P84101 59 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 AKR1C1Q04828 323 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 CLINT1Q14677 625 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 BSXQ3C1V8 233 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 AKIRIN2Q53H80 203 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 SPINK9Q5DT21 86 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 TEX261Q6UWH6 196 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 ST8SIA2Q92186 375 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 F11RQ9Y624 299 aaKnown RBP8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 TENM4Q6N022 2769 aa8.07□□□□□ -1.12
FOXCUT-201ENST00000628509 FASNP49327 2511 aaKnown RBP8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 MED13LQ71F56 2210 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 ABCA2Q9BZC7 2435 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TRAV30A0A087WSZ9 112 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 SMCO3A2RU48 225 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 C15orf62A8K5M9 175 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TRIM77I1YAP6 450 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TMEM50AO95807 157 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 RNASE2P10153 161 aaKnown RBP8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 OPRK1P41145 380 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 PJVKQ0ZLH3 352 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 LY6EQ16553 131 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 C9orf152Q5JTZ5 239 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TEPPQ6URK8 271 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 UNQ5815/PRO19632Q6UWF5 114 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 CLEC9AQ6UXN8 241 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TTC9CQ8N5M4 171 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 SCARB1Q8WTV0 552 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 RNF141Q8WVD5 230 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 RITA1Q96K30 269 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 CXorf58Q96LI9 332 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 SMIM3Q9BZL3 60 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 PARP11Q9NR21 331 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TPSG1Q9NRR2 321 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 RNF24Q9Y225 148 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
FOXCUT-201ENST00000628509 CREBBPQ92793 2442 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 DCHS2Q6V1P9 2916 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 IGHV7-81A0A0B4J1V7 117 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 IGLC7A0M8Q6 106 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CLDN34H7C241 214 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CFDP00746 253 aaPredicted RBP8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 IGHG2P01859 326 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 IGF1P05019 195 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CRYGCP07315 174 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CTRB1P17538 263 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 NPBWR1P48145 328 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CRIP2P52943 208 aaPredicted RBP8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CD69Q07108 199 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 NDUFA5Q16718 116 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 VWC2Q2TAL6 325 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 AKR1C8PQ5T2L2 129 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 CTRB2Q6GPI1 263 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 FAM110DQ8TAY7 271 aaPredicted RBP8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 OR4C12Q96R67 309 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 ATP6V0BQ99437 205 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 P2RX4Q99571 388 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 GINS3Q9BRX5 216 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 SLC25A32Q9H2D1 315 aa8.05□□□□□ -1.12
FOXCUT-201ENST00000628509 ABCA1O95477 2261 aa8.04□□□□□ -1.12
FOXCUT-201ENST00000628509 ABCA12Q86UK0 2595 aa8.04□□□□□ -1.12
FOXCUT-201ENST00000628509 TRAV41A0A0B4J266 112 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms