RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 TRAV40A0A0B4J280 105 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 CGB1A6NKQ9 187 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 J3QLI3 93 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 RUNX1Q01196 453 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 PJVKQ0ZLH3 352 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 PLGLAQ15195 96 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 TNXAQ16473 311 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 HSD17B13Q7Z5P4 300 aaPredicted RBP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 C17orf50Q8WW18 174 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 SRSF8Q9BRL6 282 aaKnown RBP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 PARP11Q9NR21 331 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 HIF1ANQ9NWT6 349 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 PLA2G2EQ9NZK7 142 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 NUDT19A8MXV4 375 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 MPDU1O75352 247 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 FAM106CPP0CH98 169 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 SERF2P84101 59 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 C10orf55Q5SWW7 151 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 TMEM182Q6ZP80 229 aaPredicted RBP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 CENPVQ7Z7K6 275 aaPredicted RBP9.64□□□□□ -0.87
CCBE1-203ENST00000589116 PIP4P2Q8N4L2 257 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 OR10W1Q8NGF6 305 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 SPATA3Q8NHX4 192 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 C7orf69Q9H7B7 122 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 WDR83OSQ9Y284 106 aa9.64□□□□□ -0.87
CCBE1-203ENST00000589116 E7EUB6 86 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 SOX15O60248 233 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 PRH1P02810 166 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 TMEM11P17152 192 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 FGF7P21781 194 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 C5orf64Q2M2E5 130 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 AKR1C8PQ5T2L2 129 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 PXDC1Q5TGL8 231 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 Q6ZRG5 221 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 EIF4E3Q8N5X7 224 aaKnown RBP9.63□□□□□ -0.87
CCBE1-203ENST00000589116 ZNF114Q8NC26 417 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 REG4Q9BYZ8 158 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 C1RLQ9NZP8 487 aa9.63□□□□□ -0.87
CCBE1-203ENST00000589116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCBE1-203ENST00000589116 A0A1B0GW64 132 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 IGLC7A0M8Q6 106 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 C17orf112F2Z3M2 114 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 CAMLGP49069 296 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 HNF4GQ14541 408 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 TUSC1Q2TAM9 212 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 SRSF12Q8WXF0 261 aaKnown RBP9.62□□□□□ -0.87
CCBE1-203ENST00000589116 CITED4Q96RK1 184 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 RSG1Q9BU20 258 aa9.62□□□□□ -0.87
CCBE1-203ENST00000589116 MFSD2BA6NFX1 497 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 RNF223E7ERA6 249 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 OR13C7P0DN81 318 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 CD24P25063 80 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 PAX6P26367 422 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 GNB1P62873 340 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 SSBP2P81877 361 aaPredicted RBP9.61□□□□□ -0.87
CCBE1-203ENST00000589116 BTNL8Q6UX41 500 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 IL34Q6ZMJ4 242 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 ZNF709Q8N972 641 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 LYPD6BQ8NI32 183 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 RNASEH2CQ8TDP1 164 aaKnown RBP9.61□□□□□ -0.87
CCBE1-203ENST00000589116 NPCDR1Q9BY65 106 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 MEGF9Q9H1U4 602 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 NPVFQ9HCQ7 196 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 TEX22C9J3V5 150 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 TSPAN9O75954 239 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 BPIFB3P59826 476 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 RUSC1-AS1Q66K80 236 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 PVRIGQ6DKI7 326 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 FAM213BQ8TBF2 198 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 CACNG8Q8WXS5 425 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 MARC2Q969Z3 335 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 Q96MF0 132 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 KCNIP2Q9NS61 270 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 FBXO7Q9Y3I1 522 aa9.61□□□□□ -0.87
CCBE1-203ENST00000589116 CR1P17927 2039 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 CORTO00230 105 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 FCN1O00602 326 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 MBP02144 154 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 IGHV4-31P0DP07 118 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 GPX4P36969 197 aaPredicted RBP9.6□□□□□ -0.87
CCBE1-203ENST00000589116 CD69Q07108 199 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 ZNF616Q08AN1 781 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 AANATQ16613 207 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 TMEM249Q2WGJ8 235 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 ARSJQ5FYB0 599 aaPredicted RBP9.6□□□□□ -0.87
CCBE1-203ENST00000589116 ZNF562Q6V9R5 426 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 Q71RC1 249 aaPredicted RBP9.6□□□□□ -0.87
CCBE1-203ENST00000589116 COMMD1Q8N668 190 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 P2RX4Q99571 388 aa9.6□□□□□ -0.87
CCBE1-203ENST00000589116 HRH4Q9H3N8 390 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms