RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 VENTXO95231 258 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 CA2P00918 260 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 CRYGBP07316 175 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 SERF2P84101 59 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 PAX8Q06710 450 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 SSX2Q16385 188 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 PRSS8Q16651 343 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 LDLRAD2Q5SZI1 272 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 ZNF709Q8N972 641 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 FAM213BQ8TBF2 198 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 CFHR4Q92496 578 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 MALSU1Q96EH3 234 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 HRH4Q9H3N8 390 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 SIGLEC9Q9Y336 463 aa13.6□□□□□ -0.23
SREBF1-218ENST00000578469 C17orf112F2Z3M2 114 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 TEX46H3BTG2 121 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 MOSP00540 346 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 FGF7P21781 194 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 SUB1P53999 127 aaKnown RBP eCLIP13.59□□□□□ -0.23
SREBF1-218ENST00000578469 ZNF616Q08AN1 781 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 PLGLAQ15195 96 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 C2orf83Q53S99 150 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 UQCC3Q6UW78 93 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 BTNL8Q6UX41 500 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 KIAA1456Q9P272 454 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 FBXO7Q9Y3I1 522 aa13.59□□□□□ -0.23
SREBF1-218ENST00000578469 SMCO3A2RU48 225 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 MPDU1O75352 247 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 TSPAN15O95858 294 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 IGKV1D-33P01593 117 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 IGKV1-33P01594 117 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 RPL27AP46776 148 aaKnown RBP13.58□□□□□ -0.24
SREBF1-218ENST00000578469 PJVKQ0ZLH3 352 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 HES1Q14469 280 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 CENPVQ7Z7K6 275 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-218ENST00000578469 PPP1R27Q86WC6 154 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 COMMD1Q8N668 190 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 RSG1Q9BU20 258 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 ARHGAP32A7KAX9 2087 aa13.58□□□□□ -0.24
SREBF1-218ENST00000578469 FNDC10F2Z333 226 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 NPFFO15130 113 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 SOX15O60248 233 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 CNTFRP26992 372 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 BRS3P32247 399 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 RAB2AP61019 212 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 MMDQ15546 238 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 TNXAQ16473 311 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 TMEM170AQ8WVE7 144 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 EAF1Q96JC9 268 aaPredicted RBP13.57□□□□□ -0.24
SREBF1-218ENST00000578469 TPSG1Q9NRR2 321 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 WDR83OSQ9Y284 106 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 NBEAL1Q6ZS30 2694 aa13.57□□□□□ -0.24
SREBF1-218ENST00000578469 TET2Q6N021 2002 aaPredicted RBP13.56□□□□□ -0.24
SREBF1-218ENST00000578469 B4DSR2 109 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 PRSS46E5RG02 174 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 NBR2O15453 112 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 MBP02144 154 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 MSMBP08118 114 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
SREBF1-218ENST00000578469 RNASE2P10153 161 aaKnown RBP13.56□□□□□ -0.24
SREBF1-218ENST00000578469 HNF4GQ14541 408 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 BSXQ3C1V8 233 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 NPBQ8NG41 125 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 OR10W1Q8NGF6 305 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 LYPD6BQ8NI32 183 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 FBXL15Q9H469 300 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 NPVFQ9HCQ7 196 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 RFNGQ9Y644 331 aa13.56□□□□□ -0.24
SREBF1-218ENST00000578469 KRBOX1C9JBD0 128 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 HBE1P02100 147 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 H2AFB1P0C5Y9 115 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 FAM106CPP0CH98 169 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 MDKP21741 143 aaPredicted RBP13.55□□□□□ -0.24
SREBF1-218ENST00000578469 COMPP49747 757 aaPredicted RBP13.55□□□□□ -0.24
SREBF1-218ENST00000578469 GNB1P62873 340 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 MRGPRG-AS1Q2M3A8 158 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 TUSC1Q2TAM9 212 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 TMEM41BQ5BJD5 291 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 TOR2AQ5JU69 321 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 C10orf55Q5SWW7 151 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 LFNGQ8NES3 379 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 KCNIP2Q9NS61 270 aa13.55□□□□□ -0.24
SREBF1-218ENST00000578469 ANK3Q12955 4377 aaKnown RBP13.54□□□□□ -0.24
SREBF1-218ENST00000578469 TRAV20A0A0B4J274 112 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 CENPVL3A0A0U1RRI6 287 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 BTBD17A6NE02 478 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 NDUFA3O95167 84 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 OR13C7P0DN81 318 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 GATA3P23771 443 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 SAA4P35542 130 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 FHITP49789 147 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 RAB31Q13636 194 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 EBI3Q14213 229 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 C1orf159Q96HA4 380 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 SRSF8Q9BRL6 282 aaKnown RBP13.54□□□□□ -0.24
SREBF1-218ENST00000578469 NPCDR1Q9BY65 106 aa13.54□□□□□ -0.24
SREBF1-218ENST00000578469 IGHV1-69DA0A0B4J2H0 117 aa13.53□□□□□ -0.24
SREBF1-218ENST00000578469 CGB1A6NKQ9 187 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms