RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 CLPSL1A2RUU4 121 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 CHST1O43916 411 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 TSPAN9O75954 239 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 IFNA7P01567 189 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 IGHV4-59P01825 116 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 CD24P25063 80 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 POLR2GP62487 172 aaKnown RBP eCLIP8.55□□□□□ -1.04
UBE3B-205ENST00000535900 IFITM2Q01629 132 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 IZUMO4Q1ZYL8 232 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 C5orf56Q8N8D9 126 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 STOML3Q8TAV4 291 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 TMEM68Q96MH6 324 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 HIPK2Q9H2X6 1198 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 PLEKHA3Q9HB20 300 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 U3KQ87 197 aa8.55□□□□□ -1.04
UBE3B-205ENST00000535900 TRAV3A0A0B4J244 114 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 TEX50A0A1B0GTY4 177 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 CEBPZOSA8MTT3 80 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 SSSCA1O60232 199 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 JTBO76095 146 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 CNIH1O95406 144 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 PAX6P26367 422 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 CNTFRP26992 372 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 RPL27AP46776 148 aaKnown RBP8.54□□□□□ -1.04
UBE3B-205ENST00000535900 AP2S1P53680 142 aaPredicted RBP8.54□□□□□ -1.04
UBE3B-205ENST00000535900 PAX9P55771 341 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 OR2B8PP59922 312 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 MRGPRG-AS1Q2M3A8 158 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 EIF5AL1Q6IS14 154 aaKnown RBP8.54□□□□□ -1.04
UBE3B-205ENST00000535900 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 TMEM252Q8N6L7 170 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 DTD1Q8TEA8 209 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 TRRAPQ9Y4A5 3859 aa8.54□□□□□ -1.04
UBE3B-205ENST00000535900 MEGF8Q7Z7M0 2845 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 MSGN1A6NI15 193 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 CA2P00918 260 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 TPT1P13693 172 aaKnown RBP8.53□□□□□ -1.04
UBE3B-205ENST00000535900 HOXA1P49639 335 aaPredicted RBP8.53□□□□□ -1.04
UBE3B-205ENST00000535900 SUB1P53999 127 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBE3B-205ENST00000535900 ERHP84090 104 aaKnown RBP8.53□□□□□ -1.04
UBE3B-205ENST00000535900 FXYD3Q14802 87 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 TNXAQ16473 311 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 STX12Q86Y82 276 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 UBAC2Q8NBM4 344 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 ZNF680Q8NEM1 530 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 OR1L6Q8NGR2 347 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 SRSF12Q8WXF0 261 aaKnown RBP8.53□□□□□ -1.04
UBE3B-205ENST00000535900 CITED1Q99966 193 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 NPFFR1Q9GZQ6 430 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 RBKSQ9H477 322 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
UBE3B-205ENST00000535900 PAIP2BQ9ULR5 123 aaKnown RBP8.53□□□□□ -1.04
UBE3B-205ENST00000535900 CYB5BO43169 146 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 DFFBO76075 338 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 TMEM50AO95807 157 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 HTR2BP41595 481 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-205ENST00000535900 SULT1A1P50225 295 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 CAV2P51636 162 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 CRIP2P52943 208 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-205ENST00000535900 HBG1P69891 147 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 HBG2P69892 147 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 CX3CL1P78423 397 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 EWSR1Q01844 656 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBE3B-205ENST00000535900 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-205ENST00000535900 PJVKQ0ZLH3 352 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 ZNF266Q14584 549 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 TMEM14EPQ6UXP3 125 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 TMEM219Q86XT9 240 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 ARPC1AQ92747 370 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 MAGT1Q9H0U3 335 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-205ENST00000535900 TPSG1Q9NRR2 321 aa8.52□□□□□ -1.05
UBE3B-205ENST00000535900 TET2Q6N021 2002 aaPredicted RBP8.52□□□□□ -1.05
UBE3B-205ENST00000535900 BORCS7-ASMTA0A0B4J1R7 106 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 IGHV7-81A0A0B4J1V7 117 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 FCN1O00602 326 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 IGHG2P01859 326 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 SNCAP37840 140 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 RAB11AP62491 216 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 GNB1P62873 340 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 LY6EQ16553 131 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 NDUFA5Q16718 116 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 ATP6V1FQ16864 119 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 BAP18Q8IXM2 172 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 LRRC20Q8TCA0 184 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 SCARB1Q8WTV0 552 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 ST8SIA2Q92186 375 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 GGACTQ9BVM4 153 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 HINT2Q9BX68 163 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 ZNF471Q9BX82 626 aaPredicted RBP8.51□□□□□ -1.05
UBE3B-205ENST00000535900 PRSS22Q9GZN4 317 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 ARV1Q9H2C2 271 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 CYTL1Q9NRR1 136 aa8.51□□□□□ -1.05
UBE3B-205ENST00000535900 PSENENQ9NZ42 101 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms