RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 WT1-ASQ06250 92 aa14.42□□□□□ -0.1
CD40-206ENST00000489304 MARC2Q969Z3 335 aa14.42□□□□□ -0.1
CD40-206ENST00000489304 C7orf69Q9H7B7 122 aa14.42□□□□□ -0.1
CD40-206ENST00000489304 WDR83OSQ9Y284 106 aa14.42□□□□□ -0.1
CD40-206ENST00000489304 TRAV20A0A0B4J274 112 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 IGHV1-69DA0A0B4J2H0 117 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 FNDC10F2Z333 226 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 ACTL6BO94805 426 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 IGHV1-69P01742 117 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 FGF7P21781 194 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 HNF4GQ14541 408 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 MMDQ15546 238 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 TNXAQ16473 311 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 TUSC1Q2TAM9 212 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 AKR1C8PQ5T2L2 129 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 DPPA3Q6W0C5 159 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 MRPL41Q8IXM3 137 aaKnown RBP14.41□□□□□ -0.1
CD40-206ENST00000489304 FBXO7Q9Y3I1 522 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 SOX21Q9Y651 276 aaPredicted RBP14.41□□□□□ -0.1
CD40-206ENST00000489304 TRAV40A0A0B4J280 105 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 RAB19A4D1S5 217 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 IGHV4-38-2P0DP08 117 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 GATA3P23771 443 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 FHITP49789 147 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 HES1Q14469 280 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 IL34Q6ZMJ4 242 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 HRH4Q9H3N8 390 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 KIAA1456Q9P272 454 aa14.41□□□□□ -0.1
CD40-206ENST00000489304 IGLC7A0M8Q6 106 aa14.4□□□□□ -0.1
CD40-206ENST00000489304 MPDU1O75352 247 aa14.4□□□□□ -0.1
CD40-206ENST00000489304 TGFAP01135 160 aa14.4□□□□□ -0.1
CD40-206ENST00000489304 SSBP2P81877 361 aaPredicted RBP14.4□□□□□ -0.1
CD40-206ENST00000489304 TMEM249Q2WGJ8 235 aa14.4□□□□□ -0.1
CD40-206ENST00000489304 CIARTQ8N365 385 aaPredicted RBP14.4□□□□□ -0.1
CD40-206ENST00000489304 FAM213BQ8TBF2 198 aa14.4□□□□□ -0.1
CD40-206ENST00000489304 FCN1O00602 326 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 OR13C7P0DN81 318 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 BRS3P32247 399 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 PLGLAQ15195 96 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 C5orf64Q2M2E5 130 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 TREML4Q6UXN2 200 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 BRD3OSQ6XYD6 125 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 NPCDR1Q9BY65 106 aa14.39□□□□□ -0.11
CD40-206ENST00000489304 FAM106CPP0CH98 169 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 SUB1P53999 127 aaKnown RBP eCLIP14.38□□□□□ -0.11
CD40-206ENST00000489304 ZNF616Q08AN1 781 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 ARSJQ5FYB0 599 aaPredicted RBP14.38□□□□□ -0.11
CD40-206ENST00000489304 KLF17Q5JT82 389 aaPredicted RBP14.38□□□□□ -0.11
CD40-206ENST00000489304 NPVFQ9HCQ7 196 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 CR1P17927 2039 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 TEX22C9J3V5 150 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 I3L521 148 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 GNB1P62873 340 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 FAM120AOSQ5T036 256 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 ZNF709Q8N972 641 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 ZNF114Q8NC26 417 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 SRSF12Q8WXF0 261 aaKnown RBP14.38□□□□□ -0.11
CD40-206ENST00000489304 P2RX4Q99571 388 aa14.38□□□□□ -0.11
CD40-206ENST00000489304 SRSF8Q9BRL6 282 aaKnown RBP14.38□□□□□ -0.11
CD40-206ENST00000489304 SMCO3A2RU48 225 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 C17orf112F2Z3M2 114 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 TSPAN15O95858 294 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 TMEM11P17152 192 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 PVRIGQ6DKI7 326 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 UQCC3Q6UW78 93 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 COMMD1Q8N668 190 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 RNASEH2CQ8TDP1 164 aaKnown RBP14.37□□□□□ -0.11
CD40-206ENST00000489304 RPRMQ9NS64 109 aa14.37□□□□□ -0.11
CD40-206ENST00000489304 LSM4Q9Y4Z0 139 aaKnown RBP14.37□□□□□ -0.11
CD40-206ENST00000489304 PRRC2AP48634 2157 aaKnown RBP14.37□□□□□ -0.11
CD40-206ENST00000489304 GPX4P36969 197 aaPredicted RBP14.36□□□□□ -0.11
CD40-206ENST00000489304 TMEM41BQ5BJD5 291 aa14.36□□□□□ -0.11
CD40-206ENST00000489304 CACNG8Q8WXS5 425 aa14.36□□□□□ -0.11
CD40-206ENST00000489304 VSIRQ9H7M9 311 aa14.36□□□□□ -0.11
CD40-206ENST00000489304 PDZD2O15018 2839 aa14.36□□□□□ -0.11
CD40-206ENST00000489304 SOX15O60248 233 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 CD69Q07108 199 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 TOR2AQ5JU69 321 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 FOXC2Q99958 501 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 A0A0U1RQK1 487 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 SMAD7O15105 426 aaKnown RBP14.35□□□□□ -0.11
CD40-206ENST00000489304 CNIH1O95406 144 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 H2AFB1P0C5Y9 115 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 AREGP15514 252 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 ACSM6Q6P461 480 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 TEPPQ6URK8 271 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 MGST2Q99735 147 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 MEGF9Q9H1U4 602 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 C1RLQ9NZP8 487 aa14.35□□□□□ -0.11
CD40-206ENST00000489304 J3QLI3 93 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 MBP02144 154 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 REG1AP05451 166 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 OPRK1P41145 380 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 ELLP55199 621 aaPredicted RBP14.34□□□□□ -0.11
CD40-206ENST00000489304 GAMTQ14353 236 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 FFAR4Q5NUL3 377 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 SPSB3Q6PJ21 355 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 TMEM144Q7Z5S9 345 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 FAM210AQ96ND0 272 aa14.34□□□□□ -0.11
CD40-206ENST00000489304 FASNP49327 2511 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms