RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SIGLEC9Q9Y336 463 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 FBXO7Q9Y3I1 522 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 TNCP24821 2201 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 E7EUB6 86 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 ACTL6BO94805 426 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 KRTAP10-9P60411 292 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 MMD2Q8IY49 270 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 EIF4E3Q8N5X7 224 aaKnown RBP15.94■□□□□ 0.14
TRIM47-204ENST00000587339 MARC2Q969Z3 335 aa15.94■□□□□ 0.14
TRIM47-204ENST00000587339 PSMG3Q9BT73 122 aaPredicted RBP15.94■□□□□ 0.14
TRIM47-204ENST00000587339 TBL2Q9Y4P3 447 aaKnown RBP15.94■□□□□ 0.14
TRIM47-204ENST00000587339 WNK2Q9Y3S1 2297 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 CSMD2Q7Z408 3487 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 A0A1W2PN81 502 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 IGKV1D-33P01593 117 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 IGKV1-33P01594 117 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 CRYGBP07316 175 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 CHRNA7P36544 502 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 SNCAP37840 140 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 PRSS8Q16651 343 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 MRGPRG-AS1Q2M3A8 158 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 C10orf55Q5SWW7 151 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 AKR1C8PQ5T2L2 129 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 PPP1R27Q86WC6 154 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 FAM213BQ8TBF2 198 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 GGACTQ9BVM4 153 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 VPS13CQ709C8 3753 aa15.93■□□□□ 0.14
TRIM47-204ENST00000587339 PRSS46E5RG02 174 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 ERHP84090 104 aaKnown RBP15.92■□□□□ 0.14
TRIM47-204ENST00000587339 PAX8Q06710 450 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 CELSR2Q9HCU4 2923 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 INS-IGF2F8WCM5 200 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 MOSP00540 346 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 SLC25A16P16260 332 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 ATP5IP56385 69 aaPredicted RBP15.92■□□□□ 0.14
TRIM47-204ENST00000587339 MMDQ15546 238 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 BTNL8Q6UX41 500 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 DYNAPQ8N1N2 210 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 MALSU1Q96EH3 234 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 FBXL15Q9H469 300 aa15.92■□□□□ 0.14
TRIM47-204ENST00000587339 CGB1A6NKQ9 187 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 NUDT19A8MXV4 375 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 FGF7P21781 194 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 CD24P25063 80 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 SERF2P84101 59 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 HES1Q14469 280 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 HNF4GQ14541 408 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 PLGLAQ15195 96 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 TOR2AQ5JU69 321 aa15.91■□□□□ 0.14
TRIM47-204ENST00000587339 SMCO3A2RU48 225 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 RAB19A4D1S5 217 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 MAS1LP35410 378 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 SAA4P35542 130 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 DLK1P80370 383 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 TNXAQ16473 311 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 TUSC1Q2TAM9 212 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 BSXQ3C1V8 233 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 IL34Q6ZMJ4 242 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 LYPD6BQ8NI32 183 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 TIMM9Q9Y5J7 89 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 TENM4Q6N022 2769 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 CENPEQ02224 2701 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 MSMBP08118 114 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 C2orf83Q53S99 150 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 OR2T10Q8NGZ9 312 aa15.9■□□□□ 0.14
TRIM47-204ENST00000587339 EAF1Q96JC9 268 aaPredicted RBP15.9■□□□□ 0.14
TRIM47-204ENST00000587339 NBR2O15453 112 aa15.89■□□□□ 0.13
TRIM47-204ENST00000587339 TSPAN15O95858 294 aa15.89■□□□□ 0.13
TRIM47-204ENST00000587339 SNRNP70P08621 437 aaKnown RBP15.89■□□□□ 0.13
TRIM47-204ENST00000587339 MDKP21741 143 aaPredicted RBP15.89■□□□□ 0.13
TRIM47-204ENST00000587339 WT1-ASQ06250 92 aa15.89■□□□□ 0.13
TRIM47-204ENST00000587339 NPCDR1Q9BY65 106 aa15.89■□□□□ 0.13
TRIM47-204ENST00000587339 WDR83OSQ9Y284 106 aa15.89■□□□□ 0.13
TRIM47-204ENST00000587339 CENPVL3A0A0U1RRI6 287 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 A0A1B0GW64 132 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 RNASE2P10153 161 aaKnown RBP15.88■□□□□ 0.13
TRIM47-204ENST00000587339 RPL27AP46776 148 aaKnown RBP15.88■□□□□ 0.13
TRIM47-204ENST00000587339 COMPP49747 757 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-204ENST00000587339 GNB1P62873 340 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 DPPA3Q6W0C5 159 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 CENPVQ7Z7K6 275 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-204ENST00000587339 ZNF709Q8N972 641 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 KIAA1456Q9P272 454 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 ABCA2Q9BZC7 2435 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 B4DSR2 109 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 NPFFO15130 113 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 OR13C7P0DN81 318 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 TREML4Q6UXN2 200 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 MRPL41Q8IXM3 137 aaKnown RBP15.88■□□□□ 0.13
TRIM47-204ENST00000587339 NPBQ8NG41 125 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 NPVFQ9HCQ7 196 aa15.88■□□□□ 0.13
TRIM47-204ENST00000587339 BEX4Q9NWD9 120 aaPredicted RBP15.88■□□□□ 0.13
TRIM47-204ENST00000587339 C17orf112F2Z3M2 114 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 AGPAT2O15120 278 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 DEFB113Q30KQ7 82 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 UQCC3Q6UW78 93 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 PIP4P2Q8N4L2 257 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 AJUBAQ96IF1 538 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 SVEP1Q4LDE5 3571 aa15.87■□□□□ 0.13
TRIM47-204ENST00000587339 MPDU1O75352 247 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms