RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	TET2	Q6N021	2002 aa	Predicted RBP	10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	CGB1	A6NKQ9	187 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	PRSS46	E5RG02	174 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	CA2	P00918	260 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	PAX6	P26367	422 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	BRS3	P32247	399 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	RPL27A	P46776	148 aa	Known RBP	10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	DLK1	P80370	383 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	PJVK	Q0ZLH3	352 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	HES1	Q14469	280 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	PLGLA	Q15195	96 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	TNXA	Q16473	311 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	BSX	Q3C1V8	233 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	C2orf83	Q53S99	150 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	COMMD7	Q86VX2	200 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	PPP1R27	Q86WC6	154 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	MRPL41	Q8IXM3	137 aa	Known RBP	10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480		Q8N6K4	173 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	SAT2	Q96F10	170 aa	Predicted RBP	10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	WDR61	Q9GZS3	305 aa	Known RBP	10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	FBXL15	Q9H469	300 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	HIF1AN	Q9NWT6	349 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	PLA2G2E	Q9NZK7	142 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	ARID1A	O14497	2285 aa		10.16	□□□□□ -0.78
CACNB3-223	ENST00000552480	TRAV40	A0A0B4J280	105 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	UBE2L5P	A0A1B0GUS4	154 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	ZNF705E	A8MWA4	302 aa	Predicted RBP	10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	RNF223	E7ERA6	249 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	ACTL6B	O94805	426 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	IFNA4	P05014	189 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	RNASE2	P10153	161 aa	Known RBP	10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	COMP	P49747	757 aa	Predicted RBP	10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	RAB5C	P51148	216 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	BLOC1S1	P78537	153 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	ERH	P84090	104 aa	Known RBP	10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	C10orf55	Q5SWW7	151 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	PIP4P2	Q8N4L2	257 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR10W1	Q8NGF6	305 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	OR2G3	Q8NGZ4	309 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	PSMG3	Q9BT73	122 aa	Predicted RBP	10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	REG4	Q9BYZ8	158 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	C7orf69	Q9H7B7	122 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480	PFDN2	Q9UHV9	154 aa		10.15	□□□□□ -0.78
CACNB3-223	ENST00000552480		A0A1B0GW64	132 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	UMAD1	C9J7I0	102 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480		E7EUB6	86 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	TRIM77	I1YAP6	450 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480		J3QLI3	93 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	FAM106CP	P0CH98	169 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	TMEM11	P17152	192 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	CD24	P25063	80 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	SNCA	P37840	140 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	RUNX1	Q01196	453 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	HNF4G	Q14541	408 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	FBLN7	Q53RD9	439 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	RUSC1-AS1	Q66K80	236 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	TMEM182	Q6ZP80	229 aa	Predicted RBP	10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	KRTAP1-3	Q8IUG1	177 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	TAF15	Q92804	592 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	TIMM9	Q9Y5J7	89 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	COL12A1	Q99715	3063 aa		10.14	□□□□□ -0.79
CACNB3-223	ENST00000552480	IGHV3OR16-10	A0A075B7F0	116 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	FNDC10	F2Z333	226 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	IGHV4-31	P0DP07	118 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	MDK	P21741	143 aa	Predicted RBP	10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	FGF7	P21781	194 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	SUB1	P53999	127 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	GNB1	P62873	340 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	WT1-AS	Q06250	92 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	C5orf64	Q2M2E5	130 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	TUSC1	Q2TAM9	212 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480		Q96MF0	132 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	SRSF8	Q9BRL6	282 aa	Known RBP	10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	PARP11	Q9NR21	331 aa		10.13	□□□□□ -0.79
CACNB3-223	ENST00000552480	ABCA2	Q9BZC7	2435 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	IGLC7	A0M8Q6	106 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	TEX22	C9J3V5	150 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	FCN1	O00602	326 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	OR13C7	P0DN81	318 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	IGHV4-38-2	P0DP08	117 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	S100A1	P23297	94 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	CAMLG	P49069	296 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	SSBP2	P81877	361 aa	Predicted RBP	10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	FAM120AOS	Q5T036	256 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	AKR1C8P	Q5T2L2	129 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	PXDC1	Q5TGL8	231 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	DPPA3	Q6W0C5	159 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480		Q6ZRG5	221 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	ZNF114	Q8NC26	417 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	SRSF12	Q8WXF0	261 aa	Known RBP	10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	RSG1	Q9BU20	258 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	MEGF9	Q9H1U4	602 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	C1RL	Q9NZP8	487 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	WDR83OS	Q9Y284	106 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	RFNG	Q9Y644	331 aa		10.12	□□□□□ -0.79
CACNB3-223	ENST00000552480	SMCO3	A2RU48	225 aa		10.11	□□□□□ -0.79
CACNB3-223	ENST00000552480	MFSD2B	A6NFX1	497 aa		10.11	□□□□□ -0.79
CACNB3-223	ENST00000552480	NUDT19	A8MXV4	375 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms