RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 HBE1P02100 147 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 IFNA4P05014 189 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 FGF7P21781 194 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 SNCAP37840 140 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 COMPP49747 757 aaPredicted RBP8.85□□□□□ -0.99
VTI1A-204ENST00000480057 RAB2AP61019 212 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 RUNX1Q01196 453 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 KLRD1Q13241 179 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 MRGPRG-AS1Q2M3A8 158 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 LDLRAD2Q5SZI1 272 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 PPP1R27Q86WC6 154 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 LRRC75A-AS1Q8N1F1 130 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 ZNF709Q8N972 641 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 OR2T10Q8NGZ9 312 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 HRH4Q9H3N8 390 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 FBXO7Q9Y3I1 522 aa8.85□□□□□ -0.99
VTI1A-204ENST00000480057 IGHV4-30-2A0A087WSY4 118 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 A0A1B0GW64 132 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 A1L4Q6 167 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 J3QKU1 62 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 ACTL6BO94805 426 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 TSPAN15O95858 294 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 RNASE2P10153 161 aaKnown RBP8.84□□□□□ -0.99
VTI1A-204ENST00000480057 PLA2G2AP14555 144 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 MYOD1P15172 320 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 GATA3P23771 443 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 GPX4P36969 197 aaPredicted RBP8.84□□□□□ -0.99
VTI1A-204ENST00000480057 RPL27AP46776 148 aaKnown RBP8.84□□□□□ -0.99
VTI1A-204ENST00000480057 SUB1P53999 127 aaKnown RBP eCLIP8.84□□□□□ -0.99
VTI1A-204ENST00000480057 ZNF616Q08AN1 781 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 TMEM41BQ5BJD5 291 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 ZNF787Q6DD87 383 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 PVRIGQ6DKI7 326 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 LHFPL4Q7Z7J7 247 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 ZNF114Q8NC26 417 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 RNASEH2CQ8TDP1 164 aaKnown RBP8.84□□□□□ -0.99
VTI1A-204ENST00000480057 CACNG8Q8WXS5 425 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 PERPQ96FX8 193 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 RITA1Q96K30 269 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 RSG1Q9BU20 258 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 HINT2Q9BX68 163 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 METTL1Q9UBP6 276 aaKnown RBP8.84□□□□□ -0.99
VTI1A-204ENST00000480057 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 ZFYVE26Q68DK2 2539 aa8.84□□□□□ -0.99
VTI1A-204ENST00000480057 CGB1A6NKQ9 187 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 NBR2O15453 112 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 SNRNP70P08621 437 aaKnown RBP8.83□□□□□ -1
VTI1A-204ENST00000480057 H2AFB1P0C5Y9 115 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 OPRK1P41145 380 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 PRB3Q04118 309 aaPredicted RBP8.83□□□□□ -1
VTI1A-204ENST00000480057 Q8N6K4 173 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 MBD3L1Q8WWY6 194 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 EAF1Q96JC9 268 aaPredicted RBP8.83□□□□□ -1
VTI1A-204ENST00000480057 NPCDR1Q9BY65 106 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 SMDT1Q9H4I9 107 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 KIAA1456Q9P272 454 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
VTI1A-204ENST00000480057 HILPDAQ9Y5L2 63 aa8.83□□□□□ -1
VTI1A-204ENST00000480057 TRAV20A0A0B4J274 112 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 B4DSR2 109 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 CORTO00230 105 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 NPFFO15130 113 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 IGKV1D-33P01593 117 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 IGKV1-33P01594 117 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 MSMBP08118 114 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 BRS3P32247 399 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 RAB31Q13636 194 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 CLEC12BQ2HXU8 276 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 TUSC1Q2TAM9 212 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 TREML4Q6UXN2 200 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 TMEM144Q7Z5S9 345 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 MBD6Q96DN6 1003 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 RBMXL1Q96E39 390 aaKnown RBP8.82□□□□□ -1
VTI1A-204ENST00000480057 PBDC1Q9BVG4 233 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 TPSG1Q9NRR2 321 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
VTI1A-204ENST00000480057 LRBAP50851 2863 aa8.82□□□□□ -1
VTI1A-204ENST00000480057 MYO18BQ8IUG5 2567 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 KMT2BQ9UMN6 2715 aaPredicted RBP8.81□□□□□ -1
VTI1A-204ENST00000480057 IGLC7A0M8Q6 106 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 OPN1MWP04001 364 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 CD5P06127 495 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 FAM106CPP0CH98 169 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 OPN1MW2P0DN77 364 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 OPN1MW3P0DN78 364 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 CNTFRP26992 372 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 FHITP49789 147 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 WT1-ASQ06250 92 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 CD69Q07108 199 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 PMS2P11Q13670 270 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 PEA15Q15121 130 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 MMDQ15546 238 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 SSX2Q16385 188 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 TNXAQ16473 311 aa8.81□□□□□ -1
VTI1A-204ENST00000480057 ACOT6Q3I5F7 207 aaPredicted RBP8.81□□□□□ -1
VTI1A-204ENST00000480057 ARSJQ5FYB0 599 aaPredicted RBP8.81□□□□□ -1
VTI1A-204ENST00000480057 ETFRF1Q6IPR1 90 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms