RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Bbc3Q99ML1 193 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Washc3Q9CR27 194 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Plekha2Q9ERS5 425 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cxcl15Q9WVL7 167 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1191-ps1A0A1L1STD5 311 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 AsmtD3KU66 387 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Vmn1r138D3YTY2 306 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm8693E9PW18 306 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm4498K9J7G4 306 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Vmn1r118L7N273 306 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Foxh1O88621 401 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cdx1P18111 268 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc6a9P28571 692 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Foxl1Q64731 336 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 9430097D07RikQ8BS47 195 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Rhebl1Q9D8T3 184 aa13.93□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm19410A0A140LJC7 2098 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm438B1ASB3 393 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Arxes1C0HK79 180 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Arxes2C0HK80 180 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm43191F6YIH5 235 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Vmn1r194J3JS27 296 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Il11P47873 199 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 UbdP63072 162 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 CtseP70269 397 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tppp2Q0P5Y3 170 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Rab27bQ99P58 218 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 CamlgP49070 294 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cln6Q3U466 308 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Taar6Q5QD13 345 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Lrrc25Q8K1T1 297 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc6a8Q8VBW1 640 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1393Q8VFA7 311 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hspb9Q9DAM3 168 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 DhdhQ9DBB8 333 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Golt1aQ9DCQ3 133 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm3550W4VSN7 160 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 StomP54116 284 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Slc7a10P63115 530 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm1527Q3V0P3 650 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm10775Q3V290 127 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Opn5Q6VZZ7 377 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tmprss11fQ8BHM9 439 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Mob3aQ8BSU7 217 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Coro2aQ8C0P5 524 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Klf7Q99JB0 301 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Wbp2nlQ9D529 359 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Efcab10Q9D581 132 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Alkbh4Q9D8F1 300 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Q9DAE8 263 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ash1lQ99MY8 2958 aa13.92□□□□□ -0.18
Trim28-201ENSMUST00000005705 4930444P10RikD3YUR1 185 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm3486L7N2D0 199 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Kcns2O35174 477 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cryba1P02525 198 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 TspoP50637 169 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Megf10Q6DIB5 1147 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cypt4Q6P925 153 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Scgb2b26Q8JZX1 112 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Myct1Q8R411 188 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ntng2Q8R4F1 589 aaKnown RBP13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Rfpl4aQ8VH31 287 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ccdc198Q9CPZ1 294 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 9130008F23RikQ9D2Z6 181 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Mmp1aQ9EPL5 464 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Trex2Q9R1A9 236 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 PtprbB2RU80 1998 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tgfbr3lD3YZZ2 297 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Saa1P05366 122 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Rab1AP62821 205 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gp49aQ61450 303 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr921Q7TRC0 313 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1324Q8VEU7 332 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Tmem100Q9CQG9 134 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 DnlzQ9D113 177 aa13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Timm9Q9WV98 89 aaKnown RBP13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 Sptbn1Q62261 2363 aaKnown RBP13.91□□□□□ -0.18
Trim28-201ENSMUST00000005705 IfnabL7MTU6 190 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Fkbp8O35465 402 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 S100a3P62818 101 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Pax6P63015 422 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 St6galnac2P70277 373 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Arf1P84078 181 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Msl2Q69ZF8 577 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Arl11Q6P3A9 176 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Sys1Q78S06 156 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1000Q7TR99 314 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Zfp87Q8K2A4 540 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 SptssaQ8R207 71 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Degs2Q8R2F2 323 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1295Q8VF48 312 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Cst6Q9D1B1 149 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Bcl6bO88282 474 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Hnf1aP22361 628 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr324Q5NCC7 333 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Upk3bQ80YF6 275 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Gm10600Q8BQ57 223 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr1141Q8VFQ7 311 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Olfr114Q923Q8 312 aa13.9□□□□□ -0.18
Trim28-201ENSMUST00000005705 Ms4a6bQ99N09 244 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms