Protein–RNA interactions for Protein: Q8R207

Sptssa, Serine palmitoyltransferase small subunit A, mousemouse

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SptssaQ8R207 Gm25239-201ENSMUST00000174915 86 ntBASIC31,57■■■□□ 2,64
SptssaQ8R207 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
SptssaQ8R207 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
SptssaQ8R207 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,92■■■□□ 2,22
SptssaQ8R207 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,84■■■□□ 2,21
SptssaQ8R207 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
SptssaQ8R207 Gm15042-201ENSMUST00000120212 883 ntBASIC28,15■■■□□ 2,1
SptssaQ8R207 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
SptssaQ8R207 Psd-208ENSMUST00000224556 2034 ntBASIC27,69■■■□□ 2,02
SptssaQ8R207 Gm15045-201ENSMUST00000117359 883 ntBASIC27,56■■■□□ 2
SptssaQ8R207 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27,26■■□□□ 1,95
SptssaQ8R207 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,19■■□□□ 1,94
SptssaQ8R207 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,16■■□□□ 1,94
SptssaQ8R207 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
SptssaQ8R207 Gm24109-201ENSMUST00000175489 103 ntBASIC27,07■■□□□ 1,92
SptssaQ8R207 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
SptssaQ8R207 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
SptssaQ8R207 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26,66■■□□□ 1,86
SptssaQ8R207 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,62■■□□□ 1,85
SptssaQ8R207 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,61■■□□□ 1,85
SptssaQ8R207 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
SptssaQ8R207 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
SptssaQ8R207 Gm23366-201ENSMUST00000175022 89 ntBASIC26,5■■□□□ 1,83
SptssaQ8R207 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26,5■■□□□ 1,83
SptssaQ8R207 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
SptssaQ8R207 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26,47■■□□□ 1,83
SptssaQ8R207 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,43■■□□□ 1,82
SptssaQ8R207 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26,42■■□□□ 1,82
SptssaQ8R207 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
SptssaQ8R207 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
SptssaQ8R207 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,2■■□□□ 1,78
SptssaQ8R207 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
SptssaQ8R207 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26,18■■□□□ 1,78
SptssaQ8R207 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
SptssaQ8R207 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
SptssaQ8R207 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
SptssaQ8R207 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25,89■■□□□ 1,74
SptssaQ8R207 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25,84■■□□□ 1,73
SptssaQ8R207 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25,78■■□□□ 1,72
SptssaQ8R207 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25,76■■□□□ 1,71
SptssaQ8R207 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
SptssaQ8R207 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25,72■■□□□ 1,71
SptssaQ8R207 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,55■■□□□ 1,68
SptssaQ8R207 Gm10524-201ENSMUST00000181931 1893 ntBASIC25,54■■□□□ 1,68
SptssaQ8R207 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25,51■■□□□ 1,67
SptssaQ8R207 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25,5■■□□□ 1,67
SptssaQ8R207 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,43■■□□□ 1,66
SptssaQ8R207 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
SptssaQ8R207 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25,33■■□□□ 1,65
SptssaQ8R207 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25,2■■□□□ 1,62
SptssaQ8R207 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25,19■■□□□ 1,62
SptssaQ8R207 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
SptssaQ8R207 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25,04■■□□□ 1,6
SptssaQ8R207 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24,99■■□□□ 1,59
SptssaQ8R207 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24,98■■□□□ 1,59
SptssaQ8R207 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
SptssaQ8R207 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24,97■■□□□ 1,59
SptssaQ8R207 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24,94■■□□□ 1,58
SptssaQ8R207 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24,91■■□□□ 1,58
SptssaQ8R207 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24,87■■□□□ 1,57
SptssaQ8R207 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24,86■■□□□ 1,57
SptssaQ8R207 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24,85■■□□□ 1,57
SptssaQ8R207 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24,83■■□□□ 1,57
SptssaQ8R207 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
SptssaQ8R207 Gm42596-201ENSMUST00000196305 1958 ntBASIC24,79■■□□□ 1,56
SptssaQ8R207 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24,77■■□□□ 1,56
SptssaQ8R207 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24,75■■□□□ 1,55
SptssaQ8R207 Gm27325-201ENSMUST00000175467 74 ntBASIC24,74■■□□□ 1,55
SptssaQ8R207 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24,73■■□□□ 1,55
SptssaQ8R207 Gm25238-201ENSMUST00000174914 89 ntBASIC24,71■■□□□ 1,55
SptssaQ8R207 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24,66■■□□□ 1,54
SptssaQ8R207 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
SptssaQ8R207 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
SptssaQ8R207 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24,54■■□□□ 1,52
SptssaQ8R207 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
SptssaQ8R207 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
SptssaQ8R207 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
SptssaQ8R207 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
SptssaQ8R207 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,46■■□□□ 1,51
SptssaQ8R207 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
SptssaQ8R207 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24,43■■□□□ 1,5
SptssaQ8R207 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24,39■■□□□ 1,5
SptssaQ8R207 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24,38■■□□□ 1,49
SptssaQ8R207 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,38■■□□□ 1,49
SptssaQ8R207 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
SptssaQ8R207 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
SptssaQ8R207 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24,35■■□□□ 1,49
SptssaQ8R207 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24,35■■□□□ 1,49
SptssaQ8R207 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
SptssaQ8R207 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24,27■■□□□ 1,48
SptssaQ8R207 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24,26■■□□□ 1,47
SptssaQ8R207 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24,25■■□□□ 1,47
SptssaQ8R207 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24,23■■□□□ 1,47
SptssaQ8R207 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24,21■■□□□ 1,47
SptssaQ8R207 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24,2■■□□□ 1,46
SptssaQ8R207 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
SptssaQ8R207 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24,15■■□□□ 1,46
SptssaQ8R207 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24,14■■□□□ 1,45
SptssaQ8R207 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,12■■□□□ 1,45
SptssaQ8R207 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24,08■■□□□ 1,45
Retrieved 100 of 76,532 protein–RNA pairs in 12,1 ms