Protein–RNA interactions for Protein: Q8VH31

Rfpl4a, Ret finger protein-like 4A, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4aQ8VH31 Gm25239-201ENSMUST00000174915 86 ntBASIC37.2■■■■□ 3.55
Rfpl4aQ8VH31 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Rfpl4aQ8VH31 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Rfpl4aQ8VH31 Gm15042-201ENSMUST00000120212 883 ntBASIC32.41■■■□□ 2.78
Rfpl4aQ8VH31 Gm24109-201ENSMUST00000175489 103 ntBASIC32.29■■■□□ 2.76
Rfpl4aQ8VH31 Gm15045-201ENSMUST00000117359 883 ntBASIC31.68■■■□□ 2.66
Rfpl4aQ8VH31 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rfpl4aQ8VH31 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rfpl4aQ8VH31 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Rfpl4aQ8VH31 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rfpl4aQ8VH31 Gm23366-201ENSMUST00000175022 89 ntBASIC31.07■■■□□ 2.56
Rfpl4aQ8VH31 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rfpl4aQ8VH31 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rfpl4aQ8VH31 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Rfpl4aQ8VH31 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Rfpl4aQ8VH31 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.13■■■□□ 2.41
Rfpl4aQ8VH31 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Rfpl4aQ8VH31 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.91■■■□□ 2.38
Rfpl4aQ8VH31 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.83■■■□□ 2.37
Rfpl4aQ8VH31 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rfpl4aQ8VH31 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rfpl4aQ8VH31 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rfpl4aQ8VH31 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.68■■■□□ 2.34
Rfpl4aQ8VH31 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rfpl4aQ8VH31 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rfpl4aQ8VH31 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rfpl4aQ8VH31 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rfpl4aQ8VH31 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.41■■■□□ 2.3
Rfpl4aQ8VH31 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rfpl4aQ8VH31 Gm25238-201ENSMUST00000174914 89 ntBASIC29.4■■■□□ 2.3
Rfpl4aQ8VH31 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rfpl4aQ8VH31 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rfpl4aQ8VH31 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.13■■■□□ 2.25
Rfpl4aQ8VH31 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rfpl4aQ8VH31 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rfpl4aQ8VH31 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.85■■■□□ 2.21
Rfpl4aQ8VH31 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rfpl4aQ8VH31 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Rfpl4aQ8VH31 Psd-208ENSMUST00000224556 2034 ntBASIC28.62■■■□□ 2.17
Rfpl4aQ8VH31 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.62■■■□□ 2.17
Rfpl4aQ8VH31 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rfpl4aQ8VH31 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.53■■■□□ 2.16
Rfpl4aQ8VH31 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Rfpl4aQ8VH31 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.5■■■□□ 2.15
Rfpl4aQ8VH31 Gm27325-201ENSMUST00000175467 74 ntBASIC28.4■■■□□ 2.14
Rfpl4aQ8VH31 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.28■■■□□ 2.12
Rfpl4aQ8VH31 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rfpl4aQ8VH31 Gm25262-201ENSMUST00000174934 133 ntBASIC28.22■■■□□ 2.11
Rfpl4aQ8VH31 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rfpl4aQ8VH31 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rfpl4aQ8VH31 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.01■■■□□ 2.07
Rfpl4aQ8VH31 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rfpl4aQ8VH31 Rab21-202ENSMUST00000218831 843 ntBASIC27.95■■■□□ 2.06
Rfpl4aQ8VH31 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rfpl4aQ8VH31 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rfpl4aQ8VH31 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.89■■■□□ 2.06
Rfpl4aQ8VH31 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.88■■■□□ 2.05
Rfpl4aQ8VH31 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.82■■■□□ 2.04
Rfpl4aQ8VH31 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.78■■■□□ 2.04
Rfpl4aQ8VH31 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rfpl4aQ8VH31 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rfpl4aQ8VH31 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.68■■■□□ 2.02
Rfpl4aQ8VH31 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Rfpl4aQ8VH31 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rfpl4aQ8VH31 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
Rfpl4aQ8VH31 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rfpl4aQ8VH31 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rfpl4aQ8VH31 Gm26115-201ENSMUST00000175605 87 ntBASIC27.56■■■□□ 2
Rfpl4aQ8VH31 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.56■■■□□ 2
Rfpl4aQ8VH31 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.55■■■□□ 2
Rfpl4aQ8VH31 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.52■■■□□ 2
Rfpl4aQ8VH31 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Rfpl4aQ8VH31 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rfpl4aQ8VH31 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Rfpl4aQ8VH31 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rfpl4aQ8VH31 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Rfpl4aQ8VH31 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Rfpl4aQ8VH31 Gm8109-201ENSMUST00000194076 746 ntBASIC27.38■■□□□ 1.97
Rfpl4aQ8VH31 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rfpl4aQ8VH31 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Rfpl4aQ8VH31 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Rfpl4aQ8VH31 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.27■■□□□ 1.96
Rfpl4aQ8VH31 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.27■■□□□ 1.96
Rfpl4aQ8VH31 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rfpl4aQ8VH31 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rfpl4aQ8VH31 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rfpl4aQ8VH31 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rfpl4aQ8VH31 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.17■■□□□ 1.94
Rfpl4aQ8VH31 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rfpl4aQ8VH31 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rfpl4aQ8VH31 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rfpl4aQ8VH31 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rfpl4aQ8VH31 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rfpl4aQ8VH31 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.04■■□□□ 1.92
Rfpl4aQ8VH31 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.03■■□□□ 1.92
Rfpl4aQ8VH31 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.98■■□□□ 1.91
Rfpl4aQ8VH31 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rfpl4aQ8VH31 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Rfpl4aQ8VH31 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.95■■□□□ 1.9
Rfpl4aQ8VH31 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms