RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 APCDD1LQ8NCL9 501 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 TMEM35BQ8NCS4 154 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 OR13D1Q8NGV5 346 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 SLC25A40Q8TBP6 338 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 RPS4Y2Q8TD47 263 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 GPR119Q8TDV5 335 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 IGF2BP2-AS1Q96M15 143 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 FOPNLQ96NB1 174 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 AIF1LQ9BQI0 150 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 MAP1LC3BQ9GZQ8 125 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 VCXQ9H320 206 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 C11orf1Q9H5F2 150 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 ACER3Q9NUN7 267 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 PRR34Q9NV39 138 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 SNX12Q9UMY4 172 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 CYSLTR1Q9Y271 337 aa1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 KLK5Q9Y337 293 aaPredicted RBP1.59□□□□□ -2.15
SCARNA3-201ENST00000517097 SHANK3Q9BYB0 1731 aa1.59□□□□□ -2.16
SCARNA3-201ENST00000517097 MYH9P35579 1960 aaKnown RBP1.59□□□□□ -2.16
SCARNA3-201ENST00000517097 TANC2Q9HCD6 1990 aa1.59□□□□□ -2.16
SCARNA3-201ENST00000517097 NUP98P52948 1817 aa1.59□□□□□ -2.16
SCARNA3-201ENST00000517097 MYO5AQ9Y4I1 1855 aaKnown RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 MYO16Q9Y6X6 1858 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 COL18A1P39060 1754 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 IGKV1D-37A0A075B6S9 117 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 TRAV9-1A0A075B6T8 112 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 A0A1B0GW54 56 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 PRORSD1PA6NEY8 169 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SIGLEC16A6NMB1 481 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 A8MWP6 167 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 C16orf90A8MZG2 172 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 H3BQ85 93 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 H7C1C5 153 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 BET1O15155 118 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ORC5O43913 435 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 NDUFC2O95298 119 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 DHFRP00374 187 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 HMGN1P05114 100 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 LGALS1P09382 135 aaKnown RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SMIM17P0DL12 118 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 CCL3P10147 92 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SCGB1A1P11684 91 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 PPIBP23284 216 aaKnown RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 NPPCP23582 126 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 CRABP1P29762 137 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ATP5G3P48201 142 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 RAB13P51153 203 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 LCN6P62502 163 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 RPL30P62888 115 aaKnown RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 EIF4EBP2Q13542 120 aaPredicted RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SMCO1Q147U7 214 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 RHEBQ15382 184 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 TMEM69Q5SWH9 247 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 DCUN1D2Q6PH85 259 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 RASL11AQ6T310 242 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SSX8Q7RTT4 187 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SPATA12Q7Z6I5 190 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ZNF695Q8IW36 515 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 FAM24BQ8N5W8 94 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ZNF709Q8N972 641 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 BPIFB6Q8NFQ5 453 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 GRPEL2Q8TAA5 225 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 KLF14Q8TD94 323 aaPredicted RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SLC7A6Q92536 515 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 TOMM6Q96B49 74 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 STARD4Q96DR4 205 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SPIN2AQ99865 258 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SPIN2BQ9BPZ2 258 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ZNF2Q9BSG1 426 aaPredicted RBP1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 UPK3BQ9BT76 320 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 PBDC1Q9BVG4 233 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 C20orf27Q9GZN8 174 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 EFCAB1Q9HAE3 211 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 TP53TG3Q9ULZ0 132 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 SSR3Q9UNL2 185 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 GINS2Q9Y248 185 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 HSPB11Q9Y547 144 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 S4R3C0 116 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 LTBP4Q8N2S1 1624 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 NCKAP5O14513 1909 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 MYH6P13533 1939 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ABCC12Q96J65 1359 aa1.58□□□□□ -2.16
SCARNA3-201ENST00000517097 ARID1AO14497 2285 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 SETD5Q9C0A6 1442 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 CCDC88CQ9P219 2028 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 TRBV19A0A075B6N1 114 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 IGKV1D-43A0A0B4J1Z2 117 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 IGSF23A1L1A6 192 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 C7orf66A4D0T2 115 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 ZNF98A6NK75 572 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 CLDN25C9JDP6 229 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 I3L521 148 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 AIPO00170 330 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 ARPC5O15511 151 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 NDUFB2O95178 105 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 KRTAP1-4P0C5Y4 121 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 SLC25A16P16260 332 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 CRHBPP24387 322 aa1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 RPL27AP46776 148 aaKnown RBP1.57□□□□□ -2.16
SCARNA3-201ENST00000517097 GABRA2P47869 451 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms