RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 SNAPC5O75971 98 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 NDUFA7O95182 113 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 SLC25A6P12236 298 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 OR2B8PP59922 312 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 FXYD3Q14802 87 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 TNXAQ16473 311 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 C10orf55Q5SWW7 151 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 ZNF429Q86V71 674 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 RNASE11Q8TAA1 199 aaKnown RBP10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 OR10C1Q96KK4 312 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 C16orf95Q9H693 158 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 COA4Q9NYJ1 87 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 PRNDQ9UKY0 176 aa10.95□□□□□ -0.66
PHACTR4-203ENST00000463428 CCSO14618 274 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 IFNA21P01568 189 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 CRYBA1P05813 215 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 SULT1A3P0DMM9 295 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 SULT1A4P0DMN0 295 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 CRIP2P52943 208 aaPredicted RBP10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 SMCO1Q147U7 214 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 C9orf152Q5JTZ5 239 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 SLC35E3Q7Z769 313 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 OR4A16Q8NH70 328 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 QTRT1Q9BXR0 403 aaKnown RBP10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 SERTAD4Q9NUC0 356 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 FKBP11Q9NYL4 201 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 ZNF257Q9Y2Q1 563 aa10.94□□□□□ -0.66
PHACTR4-203ENST00000463428 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 KCNAB3O43448 404 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 IGF1P05019 195 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 RPL27AP46776 148 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 HSPE1P61604 102 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 GNB1P62873 340 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 IL15RAQ13261 267 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 TMEM95Q3KNT9 176 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 C19orf54Q5BKX5 351 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 OR5B3Q8NH48 314 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 ARPC1AQ92747 370 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 NDUFA4L2Q9NRX3 87 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 OR51B2Q9Y5P1 312 aa10.93□□□□□ -0.66
PHACTR4-203ENST00000463428 MSGN1A6NI15 193 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 TEX22C9J3V5 150 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 SSNA1O43805 119 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 ACTL6BO94805 426 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 CNIH1O95406 144 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OPN1MWP04001 364 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OPN1MW2P0DN77 364 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OPN1MW3P0DN78 364 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 HKR1P10072 659 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 PDLIM3Q53GG5 364 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 ASPHD1Q5U4P2 390 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OR4D5Q8NGN0 318 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OR1L8Q8NGR8 309 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OR52E5Q8NH55 327 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 LINC01006Q8NI28 216 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 FAM103A1Q9BTL3 118 aaKnown RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 COMMD5Q9GZQ3 224 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 ZNF580Q9UK33 172 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 GOSR2O14653 212 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 SIX6O95475 246 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 FCN2Q15485 313 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 IAH1Q2TAA2 248 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 CXorf66Q5JRM2 361 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 ZBTB8BQ8NAP8 495 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 GRPEL2Q8TAA5 225 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 NOL4LQ96MY1 436 aaPredicted RBP10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 SPIN2AQ99865 258 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 SPIN2BQ9BPZ2 258 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 WNT10AQ9GZT5 417 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 PARP11Q9NR21 331 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 HSPB7Q9UBY9 170 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
PHACTR4-203ENST00000463428 C13orf42A0A1B0GVH6 325 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 IGLC7A0M8Q6 106 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 HMX3A6NHT5 357 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 G3V318 75 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 AP4M1O00189 453 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 RBMXL2O75526 392 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 TRAPPC2P0DI81 140 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 TRAPPC2BP0DI82 140 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 CXCL3P19876 107 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 PPIFP30405 207 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 H2BFSP57053 126 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 RRAS2P62070 204 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 ID3Q02535 119 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 KRTAP24-1Q3LI83 254 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 AKIRIN2Q53H80 203 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 THOC7Q6I9Y2 204 aaKnown RBP10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 GSG1LQ6UXU4 331 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 STPG2Q8N412 459 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 LFNGQ8NES3 379 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 OR11H7Q8NGC8 314 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms