RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Foxa2P35583 459 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 CamlgP49070 294 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Bcl2l2P70345 193 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tle3Q08122 772 aaKnown RBP11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Fam180aQ8BR21 173 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1259Q8VEZ1 309 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr494Q8VG07 314 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Nxph3Q91VX5 252 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Phf19Q9CXG9 578 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Reg4Q9D8G5 157 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Hsd17b11Q9EQ06 298 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Chst1Q9EQC0 411 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 HcstQ9QUJ0 79 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Col12a1Q60847 3120 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ighv6-4A0A0A6YX19 119 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Igkv1-135A0A0B4J1H7 120 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rhox7aA2A4F1 281 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm4744D3Z3S5 154 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r160E9Q346 307 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r34G3XA52 309 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r123L7N270 307 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Fut1O09160 376 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Zfp36P22893 319 aaKnown RBP11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mas1P30554 324 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ube2kP61087 200 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rps10P63325 165 aaKnown RBP11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Otx1P80205 355 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ear1P97426 155 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1396Q7TQS8 315 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Nup35Q8R4R6 325 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Q9DAF8 208 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Phf7Q9DAG9 307 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 HpgdsQ9JHF7 199 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Sp5Q9JHX2 398 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 RprmQ9JJ72 109 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 Cd5lQ9QWK4 352 aa11.07□□□□□ -0.64
Nup88-203ENSMUST00000108531 OdamA1E960 273 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm43191F6YIH5 235 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr893K7N678 312 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm10665K7N6B7 321 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 RorcP51450 516 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 ApodP51910 189 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tcl1b1P56840 116 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Crisp3Q03402 241 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Lhfpl4Q5U4E0 247 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm5111Q8C9M4 190 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Vmn1r233Q8R294 319 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Q8VCE4 163 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr980Q8VH08 310 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ear10Q923L6 156 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 LenepQ9WVB6 61 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Col27a1Q5QNQ9 1845 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm37797A0A1D5RLC8 261 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Chek1O35280 476 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Hoxd11P23813 323 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Otx2P80206 289 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Arf1P84078 181 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Isoc2aP85094 206 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Shisa6Q3UH99 525 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ctxn2Q3URE8 81 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm21943Q5FWD5 227 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1290Q7TQX8 312 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Zfp729bQ80VN4 1045 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm5447Q8BPB2 115 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr507Q8VG13 316 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Loxl4Q924C6 757 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mansc1Q9CR33 414 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Ndufaf3Q9JKL4 185 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Fbxl17Q9QZN1 701 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 Klk4Q9Z0M1 255 aa11.06□□□□□ -0.64
Nup88-203ENSMUST00000108531 CntrlA2AL36 2334 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm11361A0A1Y7VKY1 152 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Gm17333C6EQI3 125 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 P01660 111 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mcpt8P43430 247 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rab2aP53994 212 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rps18P62270 152 aaKnown RBP11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 ShbgP97497 403 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Klf3Q60980 344 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Arg1Q61176 323 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Tle4Q62441 773 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mtch1Q791T5 389 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 SargQ8BI29 606 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr860Q8VFF7 317 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 MrgprdQ91ZB8 321 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mrpl41Q9CQN7 135 aaKnown RBP11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Q9D9C7 252 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Q9DAE7 121 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Hils1Q9QYL0 170 aa11.05□□□□□ -0.64
Nup88-203ENSMUST00000108531 Klri1B2KG20 248 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Rbm24D3Z4I3 236 aaKnown RBP11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Pax1P09084 446 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 B3gat2P59270 324 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Zglp1Q1WG82 266 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Mbd6Q3TY92 1003 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 AgaQ64191 346 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 LgalslbQ7TPX9 165 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Lhfpl1Q80SV1 220 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Poc1bQ8BHD1 476 aa11.04□□□□□ -0.64
Nup88-203ENSMUST00000108531 Olfr1342Q8VFY3 315 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms