RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Olfr1030Q8VFL5 318 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tmem178aQ9CZ16 297 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 PaplnQ9EPX2 1280 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zfp111Q9R164 701 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Anapc1P53995 1944 aaKnown RBP9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Myo9bQ9QY06 2114 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Scgb1b10A0A087WPW0 93 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm9772F6XPD8 135 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Siva1O54926 175 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hbb-yP02104 147 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 H3f3cP02301 136 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Egr1P08046 533 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 H3f3aP84244 136 aaKnown RBP9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Col12a1Q60847 3120 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Smug1Q6P5C5 279 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Spcs3Q6ZWQ7 180 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Smap2Q7TN29 428 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 SccpdhQ8R127 429 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1368Q8VFG3 314 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1141Q8VFQ7 311 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rarres2Q9DD06 162 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cldn15Q9Z0S5 227 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Fbxw27A0A1D5RLF0 466 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Trav12-2A0N8N6 114 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rplp1P47955 114 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Chrna7P49582 502 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tle4Q62441 773 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rab35Q6PHN9 201 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Igsf21Q7TNR6 468 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr452Q7TRV8 317 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 MetrnQ8C1Q4 291 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 5930422O12RikQ8C4Y4 123 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ssxb2Q8C5Z3 165 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ifi27l2bQ8VC49 283 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr483Q8VG05 315 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr38Q8VGP4 317 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tmem107Q9CPV0 140 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cisd2Q9CQB5 135 aaKnown RBP9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rcc1lQ9CYF5 461 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Arrdc2Q9D668 407 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mdp1Q9D967 164 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gnpnat1Q9JK38 184 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mmp16Q9WTR0 607 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vps13aQ5H8C4 3166 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm8251F6VUT6 1994 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Exph5Q0VAV2 1960 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr709-ps1A0A140T8J9 307 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm13547A2ARC0 163 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr554E9Q546 317 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Il4P07750 140 aa9.44□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ighv6-4A0A0A6YX19 119 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1490A0A1L1SVH0 321 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Spink14B9EJP9 96 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 D430019H16RikJ3QPM6 83 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Sh2b3O09039 548 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 RelP15307 587 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Atp4bP50992 294 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 CenptQ3TJM4 515 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Sdr39u1Q5M8N4 308 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Trav8d-1Q5R1H8 112 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 G6pc3Q6NSQ9 346 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Osbpl11Q8CI95 751 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Trib1Q8K4K4 372 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tmem144Q8VEH0 348 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr979Q8VH10 311 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cdc42ep3Q9CQC5 254 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mansc1Q9CR33 414 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Q9DAN9 164 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 PtprsB0V2N1 1907 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Pira2F8VQ94 680 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm10665K7N6B7 321 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 P01881 257 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Sod1P08228 154 aaKnown RBP9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Dvl1P51141 695 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Thbs3Q05895 956 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Bex6Q3TZW7 114 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Sf3a2Q62203 475 aaKnown RBP9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ovch2Q7M761 609 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 ErasQ7TN89 227 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Lsm11Q8BUV6 361 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Lyrm2Q8R033 88 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1184Q8VG86 311 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Q9DAF8 208 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hsf4Q9R0L1 492 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 P01822 137 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zfp2P08043 459 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 ShbgP97497 403 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 BaxQ07813 192 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vmn1r15Q14C10 299 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mbd3l2Q3UXB0 228 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 SnrpcQ62241 159 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Thap4Q6P3Z3 569 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Slc17a5Q8BN82 495 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tox4Q8BU11 619 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Galnt14Q8BVG5 550 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zfp459Q8BZ17 267 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tmem56Q8CGF5 276 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1446Q8VFX4 308 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 Dmrtc1c1Q9D410 238 aa9.43□□□□□ -0.9
Msh3-201ENSMUST00000022220 P01804 111 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms