RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 OR2B11Q5JQS5 317 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 Q8WTZ3 238 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 EDARADDQ8WWZ3 215 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 IFI27L2Q9H2X8 130 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 GNG13Q9P2W3 67 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 CTSZQ9UBR2 303 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 SLC25A10Q9UBX3 287 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-230ENST00000488543 POLQO75417 2590 aa9.99□□□□□ -0.81
HDAC6-230ENST00000488543 ZNF729A6NN14 1252 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-230ENST00000488543 C17orf98A8MV24 154 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 RAMP3O60896 148 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 SCAF4O95104 1147 aaKnown RBP9.98□□□□□ -0.81
HDAC6-230ENST00000488543 IGHV2-5P01817 119 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 FABP1P07148 127 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 SLC25A6P12236 298 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 NDUFB7P17568 137 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 MDKP21741 143 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-230ENST00000488543 ERVFRD-1P60508 538 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 UBE2KP61086 200 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 DLK1P80370 383 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 RHEBQ15382 184 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 Q3ZCU0 254 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 AKR1C8PQ5T2L2 129 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 SLC25A24Q6NUK1 477 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 LCN15Q6UWW0 184 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 ZNF429Q86V71 674 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 FAM216AQ8WUB2 273 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 LSM10Q969L4 123 aaKnown RBP9.98□□□□□ -0.81
HDAC6-230ENST00000488543 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 RAB1BQ9H0U4 201 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 CACNG5Q9UF02 275 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 MED13LQ71F56 2210 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 ZFP92A6NM28 416 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 LINC00473A8K010 186 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 MMP23AO75900 390 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 IGHV3-7P01780 117 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 LINC00205P59089 165 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 RNF212Q495C1 297 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 NRGNQ92686 78 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 LEAP2Q969E1 77 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 SLC25A31Q9H0C2 315 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 IDI2-AS1Q9NZ38 188 aa9.98□□□□□ -0.81
HDAC6-230ENST00000488543 A0A1B0GU03 582 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 KIAA1324LA8MWY0 1029 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 RPL23AP62750 156 aaKnown RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 HEPN1Q6WQI6 88 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 ZNF66Q6ZN08 573 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 HAPLN4Q86UW8 402 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 ZNF439Q8NDP4 499 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 KAAG1Q9UBP8 84 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 LINC00312Q9Y6C7 94 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 CSMD1Q96PZ7 3565 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 YLPM1P49750 1951 aaKnown RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 PIGBOS1A0A0B4J2F0 54 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 P0C879 139 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 GPR12P47775 334 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 NDUFA6P56556 154 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 MEF2CQ06413 473 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 CATR1Q13166 79 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 KIAA0141Q14154 515 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 ZNF674Q2M3X9 581 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 CT45A1Q5HYN5 189 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 C1orf229Q6ZS94 237 aaPredicted RBP9.97□□□□□ -0.81
HDAC6-230ENST00000488543 CLDND2Q8NHS1 167 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 CT45A3Q8NHU0 189 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 TCTEX1D2Q8WW35 142 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 ATP5SQ99766 215 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 RAB9BQ9NP90 201 aa9.97□□□□□ -0.81
HDAC6-230ENST00000488543 ABCA12Q86UK0 2595 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 TRAV20A0A0B4J274 112 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 hADV38S2A0JD32 116 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 IFITM10A6NMD0 228 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 J3QKU1 62 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 S100A9P06702 114 aaKnown RBP9.96□□□□□ -0.81
HDAC6-230ENST00000488543 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.81
HDAC6-230ENST00000488543 ZNF726P1Q15940 193 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 PRAMEF5Q5TYX0 476 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 GFI1BQ5VTD9 330 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 LFNGQ8NES3 379 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 HSD17B10Q99714 261 aaKnown RBP9.96□□□□□ -0.81
HDAC6-230ENST00000488543 TUBA4BQ9H853 241 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 METTL1Q9UBP6 276 aaKnown RBP9.96□□□□□ -0.81
HDAC6-230ENST00000488543 MIOXQ9UGB7 285 aa9.96□□□□□ -0.81
HDAC6-230ENST00000488543 GCN1Q92616 2671 aaKnown RBP9.96□□□□□ -0.81
HDAC6-230ENST00000488543 AP4M1O00189 453 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 PPIHO43447 177 aaKnown RBP9.96□□□□□ -0.82
HDAC6-230ENST00000488543 S1PR2O95136 353 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 GOSR1O95249 250 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 DUTP33316 252 aaKnown RBP9.96□□□□□ -0.82
HDAC6-230ENST00000488543 RAB11AP62491 216 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 RPL39P5Q59GN2 51 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 OXLD1Q5BKU9 147 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 NCR3LG1Q68D85 454 aa9.96□□□□□ -0.82
HDAC6-230ENST00000488543 TMEM200BQ69YZ2 307 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms