RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 DUSP18Q8NEJ0 188 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 SEC22AQ96IW7 307 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 CLCC1Q96S66 551 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 HSPB9Q9BQS6 159 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 WNT10AQ9GZT5 417 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 OR51J1Q9H342 316 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 PALMDQ9NP74 551 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 ZNF580Q9UK33 172 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 FLVCR2Q9UPI3 526 aa10.52□□□□□ -0.73
COL4A6-207ENST00000487645 LINC01548A6NM66 108 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 MARCH11A6NNE9 402 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 AP4M1O00189 453 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 CA2P00918 260 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 IGKV1-39P01597 117 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 IGKV1D-39P04432 117 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 G6PCP35575 357 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 PROK1P58294 105 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 PJVKQ0ZLH3 352 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM187Q14656 261 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 TRIM16LQ309B1 348 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 AWAT1Q58HT5 328 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 SSX9Q7RTT3 188 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 IL22RA2Q969J5 263 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM56Q96MV1 263 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 MDFIQ99750 246 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 GON7Q9BXV9 100 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
COL4A6-207ENST00000487645 TPSG1Q9NRR2 321 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 NUBP2Q9Y5Y2 271 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM56-RWDD3S4R434 201 aa10.51□□□□□ -0.73
COL4A6-207ENST00000487645 UPK2O00526 184 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
COL4A6-207ENST00000487645 ACTL6BO94805 426 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 CNIH1O95406 144 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 SFT2D2O95562 160 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 MECP2P51608 486 aaKnown RBP10.5□□□□□ -0.73
COL4A6-207ENST00000487645 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-207ENST00000487645 SRPXP78539 464 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 FXYD3Q14802 87 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 H2BFWTQ7Z2G1 175 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 CENPVQ7Z7K6 275 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-207ENST00000487645 ZNF695Q8IW36 515 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 ENKURQ8TC29 256 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 CHPT1Q8WUD6 406 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 RBPMSQ93062 196 aaKnown RBP10.5□□□□□ -0.73
COL4A6-207ENST00000487645 C20orf85Q9H1P6 137 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM140Q9NV12 185 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 TENM1Q9UKZ4 2725 aa10.5□□□□□ -0.73
COL4A6-207ENST00000487645 SNAPC5O75971 98 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 H2AFB2P0C5Z0 115 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 OR4E1P0C645 316 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 EGR2P11161 476 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-207ENST00000487645 RPL8P62917 257 aaKnown RBP10.49□□□□□ -0.73
COL4A6-207ENST00000487645 SSBP2P81877 361 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM267Q0VDI3 215 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-207ENST00000487645 PPP1R1AQ13522 171 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 AKIRIN2Q53H80 203 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 NRARPQ7Z6K4 114 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 FAM219AQ8IW50 185 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 SELENOHQ8IZQ5 122 aaKnown RBP10.49□□□□□ -0.73
COL4A6-207ENST00000487645 LGI3Q8N145 548 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 STPG2Q8N412 459 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 SGMS2Q8NHU3 365 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 NUDT15Q9NV35 164 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
COL4A6-207ENST00000487645 TRAV6A0A075B6T7 132 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 C9orf170A2RU37 121 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 ATP6V0E1O15342 81 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 IGKV1-5P01602 117 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 P0C879 139 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 HLA-GP17693 338 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 ANXA7P20073 488 aaKnown RBP10.48□□□□□ -0.73
COL4A6-207ENST00000487645 VAMP1P23763 118 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 SLC35B1P78383 322 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 TNXAQ16473 311 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM95Q3KNT9 176 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 C12orf54Q6X4T0 127 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 KLHDC1Q8N7A1 406 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 LRTM2Q8N967 370 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 LHFPL5Q8TAF8 219 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 WIPF2Q8TF74 440 aaPredicted RBP10.48□□□□□ -0.73
COL4A6-207ENST00000487645 ARPC1AQ92747 370 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 LSM10Q969L4 123 aaKnown RBP10.48□□□□□ -0.73
COL4A6-207ENST00000487645 RRNAD1Q96FB5 475 aaKnown RBP10.48□□□□□ -0.73
COL4A6-207ENST00000487645 TMEM68Q96MH6 324 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 PARP11Q9NR21 331 aa10.48□□□□□ -0.73
COL4A6-207ENST00000487645 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 A0A0B4J2A0 478 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 DUXBA0A1W2PPF3 345 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 PSMB11A5LHX3 300 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 MSGN1A6NI15 193 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 HAX1O00165 279 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 DUS4LO95620 317 aaKnown RBP10.47□□□□□ -0.73
COL4A6-207ENST00000487645 OR9G9P0C7N8 305 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 VDAC1P21796 283 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 AKR1C2P52895 323 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 RAB25P57735 213 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 GNB1P62873 340 aa10.47□□□□□ -0.73
COL4A6-207ENST00000487645 NDPQ00604 133 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms