RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SLC25A22Q9H936 323 aa12.43□□□□□ -0.42
DDX49-201ENST00000247003 FAM90A27PA6NNH2 459 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 TSPAN9O75954 239 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 APOA2P02652 100 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 IFNA4P05014 189 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 CRYBA1P05813 215 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 FBP1P09467 338 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
DDX49-201ENST00000247003 RAB5BP61020 215 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 EFNB3Q15768 340 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 UTF1Q5T230 341 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 HEPN1Q6WQI6 88 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
DDX49-201ENST00000247003 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
DDX49-201ENST00000247003 RPP25LQ8N5L8 163 aaKnown RBP12.42□□□□□ -0.42
DDX49-201ENST00000247003 PRNDQ9UKY0 176 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 ATMQ13315 3056 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 HCFC1P51610 2035 aa12.42□□□□□ -0.42
DDX49-201ENST00000247003 RP1L1Q8IWN7 2480 aaPredicted RBP12.42□□□□□ -0.42
DDX49-201ENST00000247003 TRAV3A0A0B4J244 114 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.41□□□□□ -0.42
DDX49-201ENST00000247003 MMP23AO75900 390 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 FOLR2P14207 255 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 CHRNB4P30926 498 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 POU2AF1Q16633 256 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 SLC35E3Q7Z769 313 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 OR13D1Q8NGV5 346 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 KCNIP2Q9NS61 270 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 WDR83OSQ9Y284 106 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 PLCE1Q9P212 2302 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 IGHV1-69-2A0A0G2JMI3 117 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 NDUFA2O43678 99 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 IGKV1D-33P01593 117 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 IGKV1-33P01594 117 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 PSMB3P49720 205 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 RAB13P51153 203 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 HSPE1P61604 102 aaKnown RBP12.41□□□□□ -0.42
DDX49-201ENST00000247003 DLK1P80370 383 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
DDX49-201ENST00000247003 PMS2P11Q13670 270 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 ST6GALNAC3Q8NDV1 305 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 ISOC2Q96AB3 205 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 MANBALQ9NQG1 85 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 TMEM14BQ9NUH8 114 aa12.41□□□□□ -0.42
DDX49-201ENST00000247003 A0A1W2PPE2 198 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 A0A1W2PPH5 198 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 C1orf196B1AJZ1 125 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 CCL21O00585 134 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 OR2C1O95371 312 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 CCL3L1P16619 93 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 CDC34P49427 236 aaPredicted RBP12.4□□□□□ -0.42
DDX49-201ENST00000247003 RNF212Q495C1 297 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 IQCF2Q8IXL9 164 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 SLC24A4Q8NFF2 622 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 OR10X1Q8NGY0 326 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.42
DDX49-201ENST00000247003 NEUROG1Q92886 237 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 OR51B2Q9Y5P1 312 aa12.4□□□□□ -0.42
DDX49-201ENST00000247003 A0A087WWC5 75 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 B4DEV8 164 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 CT45A6P0DMU7 189 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 CT45A5P0DMU8 189 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 CT45A7P0DMV0 189 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 MDKP21741 143 aaPredicted RBP12.39□□□□□ -0.43
DDX49-201ENST00000247003 NPY1RP25929 384 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 FBXL19-AS1Q494R0 122 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 TMEM200BQ69YZ2 307 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
DDX49-201ENST00000247003 PLEKHA3Q9HB20 300 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 BIN3Q9NQY0 253 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 DVL1O14640 695 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 RRHO14718 337 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
DDX49-201ENST00000247003 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 OSR1Q8TAX0 266 aaPredicted RBP12.39□□□□□ -0.43
DDX49-201ENST00000247003 HINT2Q9BX68 163 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 KAAG1Q9UBP8 84 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 ZNF257Q9Y2Q1 563 aa12.39□□□□□ -0.43
DDX49-201ENST00000247003 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 HMGB3O15347 200 aaKnown RBP12.38□□□□□ -0.43
DDX49-201ENST00000247003 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 LYPD2Q6UXB3 125 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 CA5BP1Q8WTZ4 195 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 RAB24Q969Q5 203 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
DDX49-201ENST00000247003 J3QR06 171 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 UPK2O00526 184 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 OPRK1P41145 380 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 RAB31Q13636 194 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 TREML4Q6UXN2 200 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 LINC01560Q8TB33 94 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
DDX49-201ENST00000247003 NEIL1Q96FI4 390 aaPredicted RBP12.37□□□□□ -0.43
DDX49-201ENST00000247003 HARBI1Q96MB7 349 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms