RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ndufa7Q9Z1P6 113 aaKnown RBP12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Trav6d-5A0A075B6B9 112 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm4950D3YUM8 205 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 BC048679D3YXE9 172 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Fut1O09160 376 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Igh-3P01867 404 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gsc2P56916 198 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vamp2P63044 116 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 PilraQ2YFS3 302 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Eif4e1bQ3UTA9 244 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 AgaQ64191 346 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Foxb1Q64732 325 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm13757Q7TR17 305 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r4Q8R2D3 297 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Rfpl4aQ8VH31 287 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Chst1Q9EQC0 411 aa12.88□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm20918J3QN17 227 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cd79aP11911 220 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 RorcP51450 516 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 CortP56469 109 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ube2kP61087 200 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Lhfpl4Q5U4E0 247 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cd55bQ61476 407 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cdk3Q80YP0 303 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ssxb2Q8C5Z3 165 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr156Q8VGA9 318 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Defb7Q91V70 71 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 RprmQ9JJ72 109 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ighv1-47A0A0A6YY41 117 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Trbv29A0A0G2LB96 114 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gm37797A0A1D5RLC8 261 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr102B2RT33 308 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 H2-DMaP28078 261 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 EcscrQ3TZW0 214 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Wnk2Q3UH66 2149 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 NppcQ61839 126 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Zfp729bQ80VN4 1045 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Osbpl11Q8CI95 751 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Lrrc25Q8K1T1 297 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr1420Q8VF55 309 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr101Q920Z0 308 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ccdc198Q9CPZ1 294 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cdc42ep3Q9CQC5 254 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tmem54Q9D7S1 219 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Barx1Q9ER42 254 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Gpr34Q9R1K6 375 aa12.87□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r160E9Q346 307 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r123L7N270 307 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Fabp9O08716 132 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Chek1O35280 476 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Prkar2aP12367 401 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cdx1P18111 268 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 CryabP23927 175 aaKnown RBP12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Rab19P35294 217 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Smad4P97471 551 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Perm1Q149B8 807 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr1340Q3KPC7 315 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Mbd6Q3TY92 1003 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 GalnsQ571E4 520 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr11Q60890 313 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 LgalslbQ7TPX9 165 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Zfp3Q8BLB0 497 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cpne4Q8BLR2 557 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Zbtb49Q8BXX2 756 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 SowahbQ8BZW2 760 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Fam234aQ8C0Z1 555 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Nxph3Q91VX5 252 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Phf19Q9CXG9 578 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 NmuQ9QXK8 174 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Fbxl17Q9QZN1 701 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Dchs2A0A0A6YW72 3346 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 A0A286YD13 301 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Grk6O70293 576 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Pax1P09084 446 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 MyogP12979 224 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Rab2aP53994 212 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr1137Q7TR40 310 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Sirt7Q8BKJ9 402 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Exosc2Q8VBV3 293 aaKnown RBP12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tspan2Q922J6 221 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Rnase6Q9D244 153 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr878Q9EQA9 314 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 NagkQ9QZ08 343 aa12.86□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ankrd65F6YK91 380 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Olfr893K7N678 312 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Sc5dO88822 299 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 P01798 113 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 LepP41160 167 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 AgrpP56473 131 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 NmsQ5H8A1 153 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 RflnaQ7TS73 204 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Fam180aQ8BR21 173 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Vmn1r89Q8R256 316 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Klf7Q99JB0 301 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tmem88Q9D0N8 159 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Ndufb8Q9D6J5 186 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Cdk20Q9JHU3 346 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 LenepQ9WVB6 61 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Klk4Q9Z0M1 255 aa12.85□□□□□ -0.35
Nup54-201ENSMUST00000038514 Tet1Q3URK3 2007 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 55.4 ms