Protein–RNA interactions for Protein: Q80YP0

Cdk3, Cyclin-dependent kinase 3, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk3Q80YP0 Gm25239-201ENSMUST00000174915 86 ntBASIC34.17■■■■□ 3.06
Cdk3Q80YP0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Cdk3Q80YP0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cdk3Q80YP0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cdk3Q80YP0 Gm15042-201ENSMUST00000120212 883 ntBASIC30.06■■■□□ 2.4
Cdk3Q80YP0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Cdk3Q80YP0 Gm24109-201ENSMUST00000175489 103 ntBASIC29.5■■■□□ 2.31
Cdk3Q80YP0 Gm15045-201ENSMUST00000117359 883 ntBASIC29.4■■■□□ 2.3
Cdk3Q80YP0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Cdk3Q80YP0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Cdk3Q80YP0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cdk3Q80YP0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Cdk3Q80YP0 Gm23366-201ENSMUST00000175022 89 ntBASIC28.59■■■□□ 2.17
Cdk3Q80YP0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cdk3Q80YP0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cdk3Q80YP0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.16■■■□□ 2.1
Cdk3Q80YP0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Cdk3Q80YP0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Cdk3Q80YP0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Cdk3Q80YP0 Psd-208ENSMUST00000224556 2034 ntBASIC27.85■■■□□ 2.05
Cdk3Q80YP0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Cdk3Q80YP0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Cdk3Q80YP0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Cdk3Q80YP0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cdk3Q80YP0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Cdk3Q80YP0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Cdk3Q80YP0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.56■■■□□ 2
Cdk3Q80YP0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.53■■■□□ 2
Cdk3Q80YP0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cdk3Q80YP0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.3■■□□□ 1.96
Cdk3Q80YP0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.15■■□□□ 1.94
Cdk3Q80YP0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cdk3Q80YP0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.11■■□□□ 1.93
Cdk3Q80YP0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cdk3Q80YP0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cdk3Q80YP0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cdk3Q80YP0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cdk3Q80YP0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.9■■□□□ 1.9
Cdk3Q80YP0 Gm25238-201ENSMUST00000174914 89 ntBASIC26.89■■□□□ 1.9
Cdk3Q80YP0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Cdk3Q80YP0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Cdk3Q80YP0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.64■■□□□ 1.86
Cdk3Q80YP0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdk3Q80YP0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Cdk3Q80YP0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cdk3Q80YP0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdk3Q80YP0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdk3Q80YP0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cdk3Q80YP0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
Cdk3Q80YP0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.4■■□□□ 1.82
Cdk3Q80YP0 Gm27325-201ENSMUST00000175467 74 ntBASIC26.37■■□□□ 1.81
Cdk3Q80YP0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.34■■□□□ 1.81
Cdk3Q80YP0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cdk3Q80YP0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cdk3Q80YP0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cdk3Q80YP0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Cdk3Q80YP0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.15■■□□□ 1.78
Cdk3Q80YP0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.12■■□□□ 1.77
Cdk3Q80YP0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.07■■□□□ 1.76
Cdk3Q80YP0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Cdk3Q80YP0 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.02■■□□□ 1.76
Cdk3Q80YP0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
Cdk3Q80YP0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Cdk3Q80YP0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Cdk3Q80YP0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
Cdk3Q80YP0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Cdk3Q80YP0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Cdk3Q80YP0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Cdk3Q80YP0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cdk3Q80YP0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cdk3Q80YP0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Cdk3Q80YP0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Cdk3Q80YP0 Rab21-202ENSMUST00000218831 843 ntBASIC25.79■■□□□ 1.72
Cdk3Q80YP0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cdk3Q80YP0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cdk3Q80YP0 Gm25262-201ENSMUST00000174934 133 ntBASIC25.7■■□□□ 1.7
Cdk3Q80YP0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.68■■□□□ 1.7
Cdk3Q80YP0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.67■■□□□ 1.7
Cdk3Q80YP0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.67■■□□□ 1.7
Cdk3Q80YP0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Cdk3Q80YP0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Cdk3Q80YP0 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.58■■□□□ 1.69
Cdk3Q80YP0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Cdk3Q80YP0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Cdk3Q80YP0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cdk3Q80YP0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cdk3Q80YP0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cdk3Q80YP0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Cdk3Q80YP0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.37■■□□□ 1.65
Cdk3Q80YP0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.36■■□□□ 1.65
Cdk3Q80YP0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Cdk3Q80YP0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.28■■□□□ 1.64
Cdk3Q80YP0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Cdk3Q80YP0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Cdk3Q80YP0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdk3Q80YP0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Cdk3Q80YP0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cdk3Q80YP0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.18■■□□□ 1.62
Cdk3Q80YP0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.17■■□□□ 1.62
Cdk3Q80YP0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms