RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SNAPC3Q92966 411 aa12.37□□□□□ -0.43
VMA21-202ENST00000370361 RSRP1Q9BUV0 290 aa12.37□□□□□ -0.43
VMA21-202ENST00000370361 VCX3AQ9NNX9 186 aa12.37□□□□□ -0.43
VMA21-202ENST00000370361 COA4Q9NYJ1 87 aa12.37□□□□□ -0.43
VMA21-202ENST00000370361 PEMTQ9UBM1 199 aa12.37□□□□□ -0.43
VMA21-202ENST00000370361 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
VMA21-202ENST00000370361 MPPED1O15442 326 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 TMEM127O75204 238 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 TNXAQ16473 311 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 RPEL1Q2QD12 228 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 CDNFQ49AH0 187 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 LCN12Q6JVE5 192 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 KCTD9Q7L273 389 aa12.36□□□□□ -0.43
VMA21-202ENST00000370361 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
VMA21-202ENST00000370361 SRSF12Q8WXF0 261 aaKnown RBP12.36□□□□□ -0.43
VMA21-202ENST00000370361 HSD17B10Q99714 261 aaKnown RBP12.36□□□□□ -0.43
VMA21-202ENST00000370361 ELF5Q9UKW6 265 aaPredicted RBP12.36□□□□□ -0.43
VMA21-202ENST00000370361 A0A0A6YYH2 397 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 MSGN1A6NI15 193 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 A6NJ64 397 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 HLA-DQB1P01920 261 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 GNG2P59768 71 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 DYRK1AQ13627 763 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 MSMO1Q15800 293 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 GTSCR1Q86UQ5 136 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 Q8N402 240 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 MAFIPQ8WZ33 124 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 C5orf30Q96GV9 206 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 AIFM2Q9BRQ8 373 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 RHBDL2Q9NX52 303 aa12.35□□□□□ -0.43
VMA21-202ENST00000370361 ANKRD34BA5PLL1 514 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 LINC00473A8K010 186 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 TUSC2O75896 110 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 IGHV4-30-4P0DP06 118 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 MAS1LP35410 378 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 TGFBR1P36897 503 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 IDNKQ5T6J7 187 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 LAX1Q8IWV1 398 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 NECAP1Q8NC96 275 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 OR5H6Q8NGV6 325 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 ACOT12Q8WYK0 555 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 SLC25A38Q96DW6 304 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 DCUN1D5Q9BTE7 237 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 ST6GALNAC5Q9BVH7 336 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 RBMX2Q9Y388 322 aaKnown RBP12.34□□□□□ -0.43
VMA21-202ENST00000370361 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
VMA21-202ENST00000370361 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 TRBV9A0A0B4J1U6 114 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 SAA1P0DJI8 122 aaPredicted RBP12.33□□□□□ -0.44
VMA21-202ENST00000370361 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 SYNJ2BPP57105 145 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 MRGPRG-AS1Q2M3A8 158 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 ZNF66Q6ZN08 573 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 TTC9CQ8N5M4 171 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 KCTD12Q96CX2 325 aaKnown RBP12.33□□□□□ -0.44
VMA21-202ENST00000370361 CITED4Q96RK1 184 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 ZNF430Q9H8G1 570 aaPredicted RBP12.33□□□□□ -0.44
VMA21-202ENST00000370361 C19orf73Q9NVV2 129 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 ZNF257Q9Y2Q1 563 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 TNCP24821 2201 aa12.33□□□□□ -0.44
VMA21-202ENST00000370361 TMEM235A6NFC5 223 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 FCGR3BO75015 233 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 DHFRP00374 187 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 RHOGP84095 191 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 Q8N1Y9 231 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 ZBTB34Q8NCN2 500 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 SPATA2Q9UM82 520 aa12.32□□□□□ -0.44
VMA21-202ENST00000370361 HRASP01112 189 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 RPS19P39019 145 aaKnown RBP12.31□□□□□ -0.44
VMA21-202ENST00000370361 LSM3P62310 102 aaKnown RBP12.31□□□□□ -0.44
VMA21-202ENST00000370361 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
VMA21-202ENST00000370361 CASC10Q5T4H9 136 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 IL34Q6ZMJ4 242 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 IDO2Q6ZQW0 420 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 CROCCP3Q8IVE0 287 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 NUDCD2Q8WVJ2 157 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 OR2A7Q96R45 310 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 SPATA25Q9BR10 227 aa12.31□□□□□ -0.44
VMA21-202ENST00000370361 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.3□□□□□ -0.44
VMA21-202ENST00000370361 NPIPB5A8MRT5 1133 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 SSX5O60225 188 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 KBTBD11O94819 623 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 CSN3P07498 182 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 SMIM18P0DKX4 95 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 LYL1P12980 280 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
VMA21-202ENST00000370361 ARPC4P59998 168 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 OR4A5Q8NH83 315 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 TMEM167AQ8TBQ9 72 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 ISOC1Q96CN7 298 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 FUNDC2Q9BWH2 189 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
VMA21-202ENST00000370361 AKIP1Q9NQ31 210 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms