RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	ARP4	P80428	489 aa		1.83	□□□□□ -2.12
snR46	snR46	GPD1	Q00055	391 aa	Known RBP	1.83	□□□□□ -2.12
snR46	snR46	SNP1	Q00916	300 aa	Predicted RBP	1.83	□□□□□ -2.12
snR46	snR46	GFD1	Q04839	188 aa	Known RBP	1.83	□□□□□ -2.12
snR46	snR46	SEC3	P33332	1336 aa	Known RBP	1.83	□□□□□ -2.12
snR46	snR46	WHI2	P12611	486 aa		1.82	□□□□□ -2.12
snR46	snR46	SRP40	P32583	406 aa	Predicted RBP	1.82	□□□□□ -2.12
snR46	snR46	YHR202W	P38887	602 aa		1.82	□□□□□ -2.12
snR46	snR46	OAF1	P39720	1047 aa	Predicted RBP	1.82	□□□□□ -2.12
snR46	snR46	BST1	P43571	1029 aa		1.82	□□□□□ -2.12
snR46	snR46	BIT61	P47041	543 aa		1.82	□□□□□ -2.12
snR46	snR46	BRE5	P53741	515 aa	Known RBP	1.82	□□□□□ -2.12
snR46	snR46	VBA4	Q04602	768 aa	Known RBP	1.82	□□□□□ -2.12
snR46	snR46	TPO3	Q06451	622 aa		1.82	□□□□□ -2.12
snR46	snR46	BSP1	Q06604	576 aa		1.82	□□□□□ -2.12
snR46	snR46	YPL216W	Q08964	1102 aa		1.82	□□□□□ -2.12
snR46	snR46	PHO2	P07269	559 aa		1.81	□□□□□ -2.12
snR46	snR46	FRS1	P15624	595 aa	Known RBP	1.81	□□□□□ -2.12
snR46	snR46	GAL11	P19659	1081 aa		1.81	□□□□□ -2.12
snR46	snR46	ATO2	P32907	282 aa		1.81	□□□□□ -2.12
snR46	snR46	MNN4	P36044	1178 aa		1.81	□□□□□ -2.12
snR46	snR46	MRPL7	P36519	292 aa		1.81	□□□□□ -2.12
snR46	snR46	SDS24	P38314	527 aa		1.81	□□□□□ -2.12
snR46	snR46	MTG2	P38860	518 aa		1.81	□□□□□ -2.12
snR46	snR46	YIL092W	P40497	633 aa		1.81	□□□□□ -2.12
snR46	snR46	YIR016W	P40572	265 aa		1.81	□□□□□ -2.12
snR46	snR46	CAF16	P43569	289 aa		1.81	□□□□□ -2.12
snR46	snR46	BOP3	P53958	396 aa		1.81	□□□□□ -2.12
snR46	snR46	YNL018C	P53976	612 aa		1.81	□□□□□ -2.12
snR46	snR46	YPL071C	Q02864	156 aa		1.81	□□□□□ -2.12
snR46	snR46	GRS2	Q06817	618 aa		1.81	□□□□□ -2.12
snR46	snR46	NRT1	Q08485	598 aa		1.81	□□□□□ -2.12
snR46	snR46	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	1.81	□□□□□ -2.12	not detected
snR46	snR46	RDL1	Q12305	139 aa	Known RBP	1.81	□□□□□ -2.12
snR46	snR46	BI2	P03873	423 aa		1.8	□□□□□ -2.12
snR46	snR46	CNE1	P27825	502 aa		1.8	□□□□□ -2.12
snR46	snR46	YHR020W	P38708	688 aa	Known RBP	1.8	□□□□□ -2.12
snR46	snR46	GDH3	P39708	457 aa		1.8	□□□□□ -2.12
snR46	snR46	TMN3	P40071	706 aa		1.8	□□□□□ -2.12
snR46	snR46	IRC7	P43623	340 aa		1.8	□□□□□ -2.12
snR46	snR46	LYS20	P48570	428 aa	Known RBP	1.8	□□□□□ -2.12
snR46	snR46	CDC9	P04819	755 aa		1.79	□□□□□ -2.12
snR46	snR46	PRP22	P24384	1145 aa	Known RBP	1.79	□□□□□ -2.12
snR46	snR46	YKR075C	P36155	307 aa		1.79	□□□□□ -2.12
snR46	snR46	SSZ1	P38788	538 aa	Known RBP	1.79	□□□□□ -2.12
snR46	snR46	CFD1	P40558	293 aa		1.79	□□□□□ -2.12
snR46	snR46	YFL015C	P43578	164 aa		1.79	□□□□□ -2.12
snR46	snR46	MDV1	P47025	714 aa		1.79	□□□□□ -2.12
snR46	snR46	HUL5	P53119	910 aa		1.79	□□□□□ -2.12
snR46	snR46	CEF1	Q03654	590 aa	Predicted RBP	1.79	□□□□□ -2.12
snR46	snR46	YLR111W	Q12528	110 aa		1.79	□□□□□ -2.12
snR46	snR46	YER190C-B	P0CX94	160 aa		1.78	□□□□□ -2.12
snR46	snR46	YEL077W-A	P0CX95	160 aa		1.78	□□□□□ -2.12
snR46	snR46	YGR296C-B	P0CX96	160 aa		1.78	□□□□□ -2.12
snR46	snR46	YPL283W-B	P0CX97	160 aa		1.78	□□□□□ -2.12
snR46	snR46	YPR204C-A	P0CX98	160 aa		1.78	□□□□□ -2.12
snR46	snR46	GSY1	P23337	708 aa		1.78	□□□□□ -2.12
snR46	snR46	MIH1	P23748	554 aa		1.78	□□□□□ -2.12
snR46	snR46	GSY2	P27472	705 aa		1.78	□□□□□ -2.12
snR46	snR46	HOG1	P32485	435 aa		1.78	□□□□□ -2.12
snR46	snR46	PET127	P32606	800 aa		1.78	□□□□□ -2.12
snR46	snR46	COP1	P53622	1201 aa	Known RBP	1.78	□□□□□ -2.12
snR46	snR46	BUD17	P53727	317 aa		1.78	□□□□□ -2.12
snR46	snR46	WAR1	Q03631	944 aa		1.78	□□□□□ -2.12
snR46	snR46	TGS1	Q12052	315 aa		1.78	□□□□□ -2.12
snR46	snR46	YEL076C-A	P0CX16	216 aa		1.77	□□□□□ -2.13
snR46	snR46	YLR464W	P0CX17	216 aa		1.77	□□□□□ -2.13
snR46	snR46	RNR3	P21672	869 aa	Known RBP	1.77	□□□□□ -2.13
snR46	snR46	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	1.77	□□□□□ -2.13	not detected
snR46	snR46	SCO2	P38072	301 aa		1.77	□□□□□ -2.13
snR46	snR46	RTT107	P38850	1070 aa		1.77	□□□□□ -2.13
snR46	snR46	YEL076C	P39971	216 aa		1.77	□□□□□ -2.13
snR46	snR46	EFR3	Q03653	782 aa	Known RBP	1.77	□□□□□ -2.13
snR46	snR46	YPT7	P32939	208 aa		1.76	□□□□□ -2.13
snR46	snR46	LOT5	P34234	306 aa		1.76	□□□□□ -2.13
snR46	snR46	YBR139W	P38109	508 aa		1.76	□□□□□ -2.13
snR46	snR46	ARC40	P38328	384 aa	Known RBP	1.76	□□□□□ -2.13
snR46	snR46	DSS1	P39112	969 aa		1.76	□□□□□ -2.13
snR46	snR46	PXA1	P41909	870 aa		1.76	□□□□□ -2.13
snR46	snR46	BFA1	P47113	574 aa		1.76	□□□□□ -2.13
snR46	snR46	YMR210W	Q03649	449 aa		1.76	□□□□□ -2.13
snR46	snR46	UBX3	Q12229	455 aa		1.76	□□□□□ -2.13
snR46	snR46	YCP4	P25349	247 aa	Known RBP	1.75	□□□□□ -2.13
snR46	snR46	IMG2	P25642	146 aa	Predicted RBP	1.75	□□□□□ -2.13
snR46	snR46	RPT3	P33298	428 aa	Known RBP	1.75	□□□□□ -2.13
snR46	snR46	YOX1	P34161	385 aa		1.75	□□□□□ -2.13
snR46	snR46	BRN1	P38170	754 aa		1.75	□□□□□ -2.13
snR46	snR46	YJR039W	P47107	1121 aa		1.75	□□□□□ -2.13
snR46	snR46	SNU71	P53207	620 aa	Known RBP	1.75	□□□□□ -2.13
snR46	snR46	YGR054W	P53235	642 aa	Known RBP	1.75	□□□□□ -2.13
snR46	snR46	RPL15B	P54780	204 aa	Predicted RBP	1.75	□□□□□ -2.13
snR46	snR46	SPN1	Q06505	410 aa	Predicted RBP	1.75	□□□□□ -2.13
snR46	snR46	AIM17	P23180	465 aa	Known RBP	1.74	□□□□□ -2.13
snR46	snR46	YCR043C	P25361	127 aa		1.74	□□□□□ -2.13
snR46	snR46	COQ3	P27680	312 aa		1.74	□□□□□ -2.13
snR46	snR46	DHR2	P36009	735 aa	Predicted RBP	1.74	□□□□□ -2.13
snR46	snR46	MET30	P39014	640 aa		1.74	□□□□□ -2.13
snR46	snR46	NUG1	P40010	520 aa	Known RBP	1.74	□□□□□ -2.13
snR46	snR46	SAD1	P43589	448 aa		1.74	□□□□□ -2.13
snR46	snR46	SAE2	P46946	345 aa		1.74	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms