RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	UBP12	P39538	1254 aa		5.48	□□□□□ -1.53
snR19	snR19	YJR096W	P47137	282 aa		5.48	□□□□□ -1.53
snR19	snR19	TAN1	P53072	289 aa	Predicted RBP	5.48	□□□□□ -1.53
snR19	snR19	PCL10	P53124	433 aa		5.48	□□□□□ -1.53
snR19	snR19	MDG1	P53885	366 aa		5.48	□□□□□ -1.53
snR19	snR19	ORC4	P54791	529 aa		5.48	□□□□□ -1.53
snR19	snR19	UME1	Q03010	460 aa		5.48	□□□□□ -1.53
snR19	snR19	DIB1	Q06819	143 aa	Predicted RBP	5.48	□□□□□ -1.53
snR19	snR19	RLP24	Q07915	199 aa	Known RBP	5.48	□□□□□ -1.53
snR19	snR19	CBP1	P07252	654 aa		5.47	□□□□□ -1.53
snR19	snR19	YBR259W	P38338	688 aa		5.47	□□□□□ -1.53
snR19	snR19	CKB2	P38930	258 aa		5.47	□□□□□ -1.53
snR19	snR19	GSM1	P42950	618 aa		5.47	□□□□□ -1.53
snR19	snR19	NRG1	Q03125	231 aa		5.47	□□□□□ -1.53
snR19	snR19	PET111	P08468	800 aa		5.46	□□□□□ -1.54
snR19	snR19	SRP54	P20424	541 aa	Known RBP	5.46	□□□□□ -1.54
snR19	snR19	HRR25	P29295	494 aa	Known RBP	5.46	□□□□□ -1.54
snR19	snR19	PMI40	P29952	429 aa	Known RBP	5.46	□□□□□ -1.54
snR19	snR19	EFT1	P32324	842 aa	Known RBP	5.46	□□□□□ -1.54
snR19	snR19	TRM2	P33753	639 aa		5.46	□□□□□ -1.54
snR19	snR19	FKH2	P41813	862 aa		5.46	□□□□□ -1.54
snR19	snR19	YGR237C	P50089	785 aa		5.46	□□□□□ -1.54
snR19	snR19	GPG1	P53130	126 aa		5.46	□□□□□ -1.54
snR19	snR19	NNF2	P53253	936 aa		5.46	□□□□□ -1.54
snR19	snR19	ARP4	P80428	489 aa		5.46	□□□□□ -1.54
snR19	snR19	MTQ2	Q03920	221 aa	Predicted RBP	5.46	□□□□□ -1.54
snR19	snR19	SYF1	Q04048	859 aa	Predicted RBP	5.46	□□□□□ -1.54
snR19	snR19	AIM39	Q08223	395 aa		5.46	□□□□□ -1.54
snR19	snR19	YMR084W	A2P2R3	262 aa		5.45	□□□□□ -1.54
snR19	snR19	PRP19	P32523	503 aa	Known RBP	5.45	□□□□□ -1.54
snR19	snR19	PAH1	P32567	862 aa		5.45	□□□□□ -1.54
snR19	snR19	ECM1	P39715	212 aa		5.45	□□□□□ -1.54
snR19	snR19	PRP31	P49704	494 aa	Predicted RBP	5.45	□□□□□ -1.54
snR19	snR19	RRT6	P53117	311 aa	Predicted RBP	5.45	□□□□□ -1.54
snR19	snR19	TLG1	Q03322	224 aa		5.45	□□□□□ -1.54
snR19	snR19	RBA50	Q04418	439 aa		5.45	□□□□□ -1.54
snR19	snR19	ETT1	Q08421	412 aa	Known RBP	5.45	□□□□□ -1.54
snR19	snR19	TGL5	Q12043	749 aa		5.45	□□□□□ -1.54
snR19	snR19	RRG1	Q12167	365 aa	Predicted RBP	5.45	□□□□□ -1.54
snR19	snR19	TAO3	P40468	2376 aa		5.45	□□□□□ -1.54
snR19	snR19	LYS2	P07702	1392 aa		5.44	□□□□□ -1.54
snR19	snR19	ERG4	P25340	473 aa		5.44	□□□□□ -1.54
snR19	snR19	KCC4	P25389	1037 aa		5.44	□□□□□ -1.54
snR19	snR19	AKL1	P38080	1108 aa	Known RBP	5.44	□□□□□ -1.54
snR19	snR19	RAD26	P40352	1085 aa		5.44	□□□□□ -1.54
snR19	snR19	CTF4	Q01454	927 aa		5.44	□□□□□ -1.54
snR19	snR19	PRP3	Q03338	469 aa	Predicted RBP	5.44	□□□□□ -1.54
snR19	snR19	DLT1	Q04216	342 aa		5.44	□□□□□ -1.54
snR19	snR19	DCS2	Q12123	353 aa		5.44	□□□□□ -1.54
snR19	snR19	HIF1	Q12373	385 aa		5.44	□□□□□ -1.54
snR19	snR19	MET3	P08536	511 aa		5.43	□□□□□ -1.54
snR19	snR19	ADE2	P21264	571 aa	Known RBP	5.43	□□□□□ -1.54
snR19	snR19	TSR4	P25040	408 aa		5.43	□□□□□ -1.54
snR19	snR19	LTV1	P34078	463 aa		5.43	□□□□□ -1.54
snR19	snR19	KTR4	P38131	464 aa		5.43	□□□□□ -1.54
snR19	snR19	YEN1	P40028	759 aa		5.43	□□□□□ -1.54
snR19	snR19	RET2	P43621	546 aa		5.43	□□□□□ -1.54
snR19	snR19	YJR039W	P47107	1121 aa		5.43	□□□□□ -1.54
snR19	snR19	MUP1	P50276	574 aa		5.43	□□□□□ -1.54
snR19	snR19	BRE5	P53741	515 aa	Known RBP	5.43	□□□□□ -1.54
snR19	snR19	ARG5,6	Q01217	863 aa		5.43	□□□□□ -1.54
snR19	snR19	LEE1	Q02799	301 aa	Known RBP	5.43	□□□□□ -1.54
snR19	snR19	GRX3	Q03835	250 aa		5.43	□□□□□ -1.54
snR19	snR19	HFD1	Q04458	532 aa		5.43	□□□□□ -1.54
snR19	snR19	CRF1	Q04930	467 aa		5.43	□□□□□ -1.54
snR19	snR19	YSH1	Q06224	779 aa	Predicted RBP	5.43	□□□□□ -1.54
snR19	snR19	SSP2	Q08646	371 aa		5.43	□□□□□ -1.54
snR19	snR19	TRM13	Q12383	476 aa		5.43	□□□□□ -1.54
snR19	snR19	TDA3	P38758	523 aa		5.42	□□□□□ -1.54
snR19	snR19	SSZ1	P38788	538 aa	Known RBP	5.42	□□□□□ -1.54
snR19	snR19	GID8	P40208	455 aa		5.42	□□□□□ -1.54
snR19	snR19	ELO3	P40319	345 aa		5.42	□□□□□ -1.54
snR19	snR19	GPP1	P41277	250 aa	Known RBP	5.42	□□□□□ -1.54
snR19	snR19	AMA1	P50082	593 aa		5.42	□□□□□ -1.54
snR19	snR19	PAP2	P53632	584 aa	Known RBP	5.42	□□□□□ -1.54
snR19	snR19	TEX1	P53851	422 aa	Known RBP	5.42	□□□□□ -1.54
snR19	snR19	VPS64	Q03944	604 aa		5.42	□□□□□ -1.54
snR19	snR19	FAP7	Q12055	197 aa	Predicted RBP	5.42	□□□□□ -1.54
snR19	snR19	TUB2	P02557	457 aa	Known RBP	5.41	□□□□□ -1.54
snR19	snR19	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
snR19	snR19	YHR112C	P38716	378 aa		5.41	□□□□□ -1.54
snR19	snR19	YIR042C	P40586	236 aa		5.41	□□□□□ -1.54
snR19	snR19	GZF3	P42944	551 aa	Known RBP	5.41	□□□□□ -1.54
snR19	snR19	ZDS2	P54786	942 aa		5.41	□□□□□ -1.54
snR19	snR19	GAD1	Q04792	585 aa		5.41	□□□□□ -1.54
snR19	snR19	MCM21	Q06675	368 aa		5.41	□□□□□ -1.54
snR19	snR19	YLR040C	Q07988	224 aa		5.41	□□□□□ -1.54
snR19	snR19	YTM1	Q12024	460 aa	Predicted RBP	5.41	□□□□□ -1.54
snR19	snR19	ATG11	Q12527	1178 aa		5.41	□□□□□ -1.54
snR19	snR19	LAT1	P12695	482 aa	Known RBP	5.4	□□□□□ -1.54
snR19	snR19	APT2	P36973	181 aa		5.4	□□□□□ -1.54
snR19	snR19	YBR053C	P38235	358 aa		5.4	□□□□□ -1.54
snR19	snR19	CCT5	P40413	562 aa	Known RBP	5.4	□□□□□ -1.54
snR19	snR19	AIM21	P40563	679 aa		5.4	□□□□□ -1.54
snR19	snR19	SET2	P46995	733 aa	Known RBP	5.4	□□□□□ -1.54
snR19	snR19	YGR153W	P48238	217 aa		5.4	□□□□□ -1.54
snR19	snR19	RPT4	P53549	437 aa	Known RBP	5.4	□□□□□ -1.54
snR19	snR19	SUN4	P53616	420 aa		5.4	□□□□□ -1.54
snR19	snR19	GPD1	Q00055	391 aa	Known RBP	5.4	□□□□□ -1.54
snR19	snR19	TRZ1	P36159	838 aa	Predicted RBP	5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms