RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	BET4	Q00618	327 aa		7.15	□□□□□ -1.26
SNT309	YPR101W	HMO1	Q03973	246 aa	Known RBP	7.15	□□□□□ -1.26
SNT309	YPR101W	COQ9	Q05779	260 aa		7.15	□□□□□ -1.26
SNT309	YPR101W	NOT5	Q12514	560 aa	Predicted RBP	7.15	□□□□□ -1.26
SNT309	YPR101W	TAL1	P15019	335 aa	Known RBP	7.14	□□□□□ -1.27
SNT309	YPR101W	HPR1	P17629	752 aa	Known RBP	7.14	□□□□□ -1.27
SNT309	YPR101W	SLY1	P22213	666 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	TRX1	P22217	103 aa	Known RBP	7.14	□□□□□ -1.27
SNT309	YPR101W	KIN82	P25341	720 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	URA7	P28274	579 aa	Known RBP	7.14	□□□□□ -1.27
SNT309	YPR101W	IRE1	P32361	1115 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	GYP6	P32806	458 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	ETR1	P38071	380 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	YBP1	P38315	674 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	SNZ3	P43545	298 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	7.14	□□□□□ -1.27	not detected
SNT309	YPR101W	UBP15	P50101	1230 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	CUL3	P53202	744 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	YGR117C	P53270	476 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	COS6	P53344	381 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	SNZ2	P53824	298 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	YNL146W	P53906	100 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	UBX5	Q06682	500 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	ATG20	Q07528	640 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	TRM11	Q12463	433 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	AVL9	Q12500	764 aa		7.14	□□□□□ -1.27
SNT309	YPR101W	DED1	P06634	604 aa	Known RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	IMA3	P0CW40	589 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	IMA4	P0CW41	589 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	RRT12	P25381	491 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	MCM5	P29496	775 aa	Known RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	DPH5	P32469	300 aa	Predicted RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	GLC3	P32775	704 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	PEX2	P32800	271 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	SWC5	P38326	303 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	SAW1	P39735	261 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	SCC4	P40090	624 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	KHA1	P40309	873 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	SEC27	P41811	889 aa	Known RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	MCM6	P53091	1017 aa	Known RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	NUT1	P53114	1132 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	USE1	P53146	245 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	BIO4	P53630	237 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	RCF2	P53721	224 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	NOP15	P53927	220 aa	Predicted RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	ADE13	Q05911	482 aa	Known RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	ADY3	Q07732	790 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	IMA2	Q08295	589 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	YOR059C	Q08448	450 aa	Known RBP	7.13	□□□□□ -1.27
SNT309	YPR101W	CSR2	Q12734	1121 aa		7.13	□□□□□ -1.27
SNT309	YPR101W	RIF1	P29539	1916 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	RPL24A	P04449	155 aa	Known RBP	7.12	□□□□□ -1.27
SNT309	YPR101W	PYC2	P32327	1180 aa	Known RBP	7.12	□□□□□ -1.27
SNT309	YPR101W	DPH2	P32461	534 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	SHP1	P34223	423 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	OCT1	P35999	772 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	CUE2	P36075	443 aa	Known RBP	7.12	□□□□□ -1.27
SNT309	YPR101W	YEL025C	P39991	1188 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	EAF5	P39995	279 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	MKT1	P40850	830 aa	Known RBP	7.12	□□□□□ -1.27
SNT309	YPR101W	RNR4	P49723	345 aa	Known RBP	7.12	□□□□□ -1.27
SNT309	YPR101W	YNL108C	P53929	270 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	OSH6	Q02201	448 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	YKU80	Q04437	629 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	ECM7	Q06200	448 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	YET3	Q07451	203 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	7.12	□□□□□ -1.27	not detected
SNT309	YPR101W	CIR2	Q08822	631 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	RUP1	Q12242	671 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	TAF3	Q12297	353 aa		7.12	□□□□□ -1.27
SNT309	YPR101W	FBP1	P09201	348 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	NPP1	P25353	742 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	SEC1	P30619	724 aa	Known RBP	7.11	□□□□□ -1.27
SNT309	YPR101W	BCS1	P32839	456 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	MRP4	P32902	394 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	NUP120	P35729	1037 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	YMC2	P38087	329 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	CBR1	P38626	284 aa	Known RBP	7.11	□□□□□ -1.27
SNT309	YPR101W	YHL008C	P38750	627 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	TDA11	P38854	504 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	BEM4	P39011	633 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	FLC2	P39719	783 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	FRT2	P39734	528 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	SUM1	P46676	1062 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	FMP33	P46998	180 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	YJL007C	P47080	104 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	RSA3	Q05942	220 aa	Known RBP	7.11	□□□□□ -1.27
SNT309	YPR101W	SNX3	Q08826	162 aa	Known RBP	7.11	□□□□□ -1.27
SNT309	YPR101W	YIG1	Q08956	461 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	SLP1	Q12232	587 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	MOT1	P32333	1867 aa		7.11	□□□□□ -1.27
SNT309	YPR101W	TEF1	P02994	458 aa	Known RBP	7.1	□□□□□ -1.27
SNT309	YPR101W	GPA2	P10823	449 aa		7.1	□□□□□ -1.27
SNT309	YPR101W	PUT4	P15380	627 aa		7.1	□□□□□ -1.27
SNT309	YPR101W	TKL1	P23254	680 aa	Known RBP	7.1	□□□□□ -1.27
SNT309	YPR101W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.1	□□□□□ -1.27	not detected
SNT309	YPR101W	CDC20	P26309	610 aa		7.1	□□□□□ -1.27
SNT309	YPR101W	GAR1	P28007	205 aa	Known RBP	7.1	□□□□□ -1.27
SNT309	YPR101W	MEI4	P29467	408 aa		7.1	□□□□□ -1.27
SNT309	YPR101W	EFT1	P32324	842 aa	Known RBP	7.1	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms