RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W SRP40P32583 406 aaPredicted RBP2.55□□□□□ -2
YOP1YPR028W PBP2P38151 413 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
YOP1YPR028W APD1P38281 316 aa2.55□□□□□ -2
YOP1YPR028W CHZ1P40019 153 aaPredicted RBP2.55□□□□□ -2
YOP1YPR028W YJL043WP47053 257 aa2.55□□□□□ -2
YOP1YPR028W IDP3P53982 420 aaKnown RBP2.55□□□□□ -2
YOP1YPR028W VBA4Q04602 768 aaKnown RBP2.55□□□□□ -2
YOP1YPR028W VHS3Q08438 674 aa2.55□□□□□ -2
YOP1YPR028W HER1Q12276 1246 aa2.55□□□□□ -2
YOP1YPR028W CRC1Q12289 327 aa2.55□□□□□ -2
YOP1YPR028W RPL7AP05737 244 aaKnown RBP2.54□□□□□ -2
YOP1YPR028W PHO2P07269 559 aa2.54□□□□□ -2
YOP1YPR028W YAP1P19880 650 aaKnown RBP2.54□□□□□ -2
YOP1YPR028W URE2P23202 354 aaKnown RBP2.54□□□□□ -2
YOP1YPR028W MGM1P32266 881 aa2.54□□□□□ -2
YOP1YPR028W TIM23P32897 222 aa2.54□□□□□ -2
YOP1YPR028W RPC34P32910 317 aa2.54□□□□□ -2
YOP1YPR028W MNN4P36044 1178 aa2.54□□□□□ -2
YOP1YPR028W AKL1P38080 1108 aaKnown RBP2.54□□□□□ -2
YOP1YPR028W SSZ1P38788 538 aaKnown RBP2.54□□□□□ -2
YOP1YPR028W YHR202WP38887 602 aa2.54□□□□□ -2
YOP1YPR028W BIT61P47041 543 aa2.54□□□□□ -2
YOP1YPR028W MRPL1Q04599 285 aa2.54□□□□□ -2
YOP1YPR028W SRL1Q08673 210 aa2.54□□□□□ -2
YOP1YPR028W RPL7BQ12213 244 aaKnown RBP2.54□□□□□ -2
YOP1YPR028W FRS1P15624 595 aaKnown RBP2.53□□□□□ -2
YOP1YPR028W PET127P32606 800 aa2.53□□□□□ -2
YOP1YPR028W YKL091CP33324 310 aaKnown RBP2.53□□□□□ -2
YOP1YPR028W YKR075CP36155 307 aa2.53□□□□□ -2
YOP1YPR028W YOR131CQ12486 218 aa2.53□□□□□ -2
YOP1YPR028W MDM12Q92328 271 aa2.53□□□□□ -2
YOP1YPR028W SRD1P09007 221 aa2.52□□□□□ -2.01
YOP1YPR028W AQY1P0CD91 305 aa2.52□□□□□ -2.01
YOP1YPR028W PRP22P24384 1145 aaKnown RBP2.52□□□□□ -2.01
YOP1YPR028W OAF1P39720 1047 aaPredicted RBP2.52□□□□□ -2.01
YOP1YPR028W NUP82P40368 713 aa2.52□□□□□ -2.01
YOP1YPR028W YJR039WP47107 1121 aa2.52□□□□□ -2.01
YOP1YPR028W YIP4P53093 235 aa2.52□□□□□ -2.01
YOP1YPR028W MFM1Q02783 413 aa2.52□□□□□ -2.01
YOP1YPR028W YDL073WQ07454 984 aa2.52□□□□□ -2.01
YOP1YPR028W YMR084WA2P2R3 262 aa2.51□□□□□ -2.01
YOP1YPR028W CPA2P03965 1118 aaKnown RBP2.51□□□□□ -2.01
YOP1YPR028W FLO5P38894 1075 aa2.51□□□□□ -2.01
YOP1YPR028W AAT1Q01802 451 aa2.51□□□□□ -2.01
YOP1YPR028W YPL216WQ08964 1102 aa2.51□□□□□ -2.01
YOP1YPR028W SEC3P33332 1336 aaKnown RBP2.5□□□□□ -2.01
YOP1YPR028W MEF1P25039 761 aa2.5□□□□□ -2.01
YOP1YPR028W IMG2P25642 146 aaPredicted RBP2.5□□□□□ -2.01
YOP1YPR028W YOX1P34161 385 aa2.5□□□□□ -2.01
YOP1YPR028W PPE1P38796 400 aa2.5□□□□□ -2.01
YOP1YPR028W NUG1P40010 520 aaKnown RBP2.5□□□□□ -2.01
YOP1YPR028W BST1P43571 1029 aa2.5□□□□□ -2.01
YOP1YPR028W AIM14P53109 570 aa2.5□□□□□ -2.01
YOP1YPR028W COQ6P53318 479 aa2.5□□□□□ -2.01
YOP1YPR028W YMR210WQ03649 449 aa2.5□□□□□ -2.01
YOP1YPR028W SNA4Q07549 140 aa2.5□□□□□ -2.01
YOP1YPR028W PHO8P11491 566 aa2.49□□□□□ -2.01
YOP1YPR028W WHI2P12611 486 aa2.49□□□□□ -2.01
YOP1YPR028W MSH2P25847 964 aa2.49□□□□□ -2.01
YOP1YPR028W ATO2P32907 282 aa2.49□□□□□ -2.01
YOP1YPR028W YMR124WP39523 943 aaKnown RBP2.49□□□□□ -2.01
YOP1YPR028W TMN3P40071 706 aa2.49□□□□□ -2.01
YOP1YPR028W BFA1P47113 574 aa2.49□□□□□ -2.01
YOP1YPR028W COG8Q04632 607 aa2.49□□□□□ -2.01
YOP1YPR028W GFD1Q04839 188 aaKnown RBP2.49□□□□□ -2.01
YOP1YPR028W DCS2Q12123 353 aa2.49□□□□□ -2.01
YOP1YPR028W YLR125WQ12138 136 aa2.49□□□□□ -2.01
YOP1YPR028W YTA7P40340 1379 aa2.49□□□□□ -2.01
YOP1YPR028W HMG1P12683 1054 aa2.48□□□□□ -2.01
YOP1YPR028W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
YOP1YPR028W YPT7P32939 208 aa2.48□□□□□ -2.01
YOP1YPR028W MAL31P38156 614 aa2.48□□□□□ -2.01
YOP1YPR028W BUD17P53727 317 aa2.48□□□□□ -2.01
YOP1YPR028W UGO1Q03327 502 aa2.48□□□□□ -2.01
YOP1YPR028W RCR2Q03446 210 aaKnown RBP2.48□□□□□ -2.01
YOP1YPR028W CEF1Q03654 590 aaPredicted RBP2.48□□□□□ -2.01
YOP1YPR028W ATG33Q06485 197 aa2.48□□□□□ -2.01
YOP1YPR028W BSP1Q06604 576 aa2.48□□□□□ -2.01
YOP1YPR028W YER190C-BP0CX94 160 aa2.47□□□□□ -2.01
YOP1YPR028W YEL077W-AP0CX95 160 aa2.47□□□□□ -2.01
YOP1YPR028W YGR296C-BP0CX96 160 aa2.47□□□□□ -2.01
YOP1YPR028W YPL283W-BP0CX97 160 aa2.47□□□□□ -2.01
YOP1YPR028W YPR204C-AP0CX98 160 aa2.47□□□□□ -2.01
YOP1YPR028W THI4P32318 326 aa2.47□□□□□ -2.01
YOP1YPR028W LOT5P34234 306 aa2.47□□□□□ -2.01
YOP1YPR028W MRPL7P36519 292 aa2.47□□□□□ -2.01
YOP1YPR028W EXO1P39875 702 aa2.47□□□□□ -2.01
YOP1YPR028W YIL024CP40543 189 aa2.47□□□□□ -2.01
YOP1YPR028W OPT1P40897 799 aa2.47□□□□□ -2.01
YOP1YPR028W PXA1P41909 870 aa2.47□□□□□ -2.01
YOP1YPR028W YGL260WP53056 76 aa2.47□□□□□ -2.01
YOP1YPR028W YNL018CP53976 612 aa2.47□□□□□ -2.01
YOP1YPR028W EFR3Q03653 782 aaKnown RBP2.47□□□□□ -2.01
YOP1YPR028W PPN1Q04119 674 aa2.47□□□□□ -2.01
YOP1YPR028W GIN4Q12263 1142 aa2.47□□□□□ -2.01
YOP1YPR028W YMR085WP0CF18 432 aa2.46□□□□□ -2.02
YOP1YPR028W CNE1P27825 502 aa2.46□□□□□ -2.02
YOP1YPR028W SPO1P53541 631 aa2.46□□□□□ -2.02
YOP1YPR028W TPO3Q06451 622 aa2.46□□□□□ -2.02
YOP1YPR028W NTG2Q08214 380 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms