RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	TY1A-JR1	P0CX74	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-LR3	P0CX75	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-ML2	P0CX76	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	LAT1	P12695	482 aa	Known RBP	4.88	□□□□□ -1.63
TRE1	YPL176C	ADP1	P25371	1049 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	RME1	P32338	300 aa	Known RBP	4.88	□□□□□ -1.63
TRE1	YPL176C	VPS17	P32913	551 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	COY1	P34237	679 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	SIF2	P38262	535 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	IFA38	P38286	347 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	EXO5	P38289	585 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	STL1	P39932	569 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	PUG1	P40100	303 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	OSW5	P40219	148 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
TRE1	YPL176C	JJJ3	P47138	172 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	RPN14	P53196	417 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	OAZ1	Q02803	292 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	MCP2	Q06567	569 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
TRE1	YPL176C	TY1A-GR1	Q12085	440 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	SKS1	Q12505	502 aa		4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.88	□□□□□ -1.63
TRE1	YPL176C	TY1A-OL	Q92392	440 aa	Known RBP	4.88	□□□□□ -1.63
TRE1	YPL176C	HTS1	P07263	546 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	NUC1	P08466	329 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	RPB2	P08518	1224 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	DBP3	P20447	523 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	HCA4	P20448	770 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	UBC1	P21734	215 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	MCM3	P24279	971 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	GYP6	P32806	458 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	TEF4	P36008	412 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	PCH2	P38126	564 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	TDA3	P38758	523 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	SPT8	P38915	602 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	UBP7	P40453	1071 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	STU2	P46675	888 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	NNF2	P53253	936 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	ETT1	Q08421	412 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	HFI1	Q12060	488 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	YRM1	Q12340	786 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	RPS21B	Q3E754	87 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	APE1	P14904	514 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	NAR1	P23503	491 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	SYP1	P25623	870 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	ADK2	P26364	225 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	NTG1	P31378	399 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	KNS1	P32350	737 aa	Predicted RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	AAR2	P32357	355 aa	Predicted RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	SSE1	P32589	693 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	ERT1	P38140	529 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	PPE1	P38796	400 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	MKT1	P40850	830 aa	Known RBP	4.87	□□□□□ -1.63
TRE1	YPL176C	TOF1	P53840	1238 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	FCP1	Q03254	732 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	HPF1	Q05164	967 aa		4.87	□□□□□ -1.63
TRE1	YPL176C	YCK2	P23292	546 aa	Known RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	SPB1	P25582	841 aa	Predicted RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	CCR4	P31384	837 aa	Known RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	MGM1	P32266	881 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	FAT1	P38225	669 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	YHR202W	P38887	602 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	ARF3	P40994	183 aa	RIP-Chip data	4.86	□□□□□ -1.63	not detected
TRE1	YPL176C	YGR283C	P53336	341 aa	Predicted RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	YNR061C	P53747	219 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	DSL1	P53847	754 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	ADA2	Q02336	434 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	SNZ1	Q03148	297 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	GIS4	Q04233	774 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	RSF1	Q05043	376 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
TRE1	YPL176C	APM4	Q99186	491 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	TAF2	P23255	1407 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	RPT3	P33298	428 aa	Known RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	AFR1	P33304	620 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	WHI3	P34761	661 aa	Known RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	GCS1	P35197	352 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
TRE1	YPL176C	OAF3	P36023	863 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	VPS45	P38932	577 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	YIL092W	P40497	633 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	EPL1	P43572	832 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	HOS3	Q02959	697 aa	Known RBP	4.86	□□□□□ -1.63
TRE1	YPL176C	RBA50	Q04418	439 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	AIM32	Q04689	311 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	MDY2	Q12285	212 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	PSY3	Q12318	242 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	NSI1	Q12457	570 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	YOR093C	Q12275	1648 aa		4.86	□□□□□ -1.63
TRE1	YPL176C	HOM2	P13663	365 aa	Known RBP	4.85	□□□□□ -1.63
TRE1	YPL176C	NPP1	P25353	742 aa		4.85	□□□□□ -1.63
TRE1	YPL176C	SFA1	P32771	386 aa		4.85	□□□□□ -1.63
TRE1	YPL176C	LOT5	P34234	306 aa		4.85	□□□□□ -1.63
TRE1	YPL176C	SWH1	P35845	1188 aa		4.85	□□□□□ -1.63
TRE1	YPL176C	POL12	P38121	705 aa	Predicted RBP	4.85	□□□□□ -1.63
TRE1	YPL176C	SMC2	P38989	1170 aa	Known RBP	4.85	□□□□□ -1.63
TRE1	YPL176C	FET4	P40988	552 aa		4.85	□□□□□ -1.63
TRE1	YPL176C	FET5	P43561	622 aa		4.85	□□□□□ -1.63
TRE1	YPL176C	BNA2	P47125	453 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms