RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C ARL1P38116 183 aaKnown RBP7.62□□□□□ -1.19
UME1YPL139C QNS1P38795 714 aaKnown RBP7.62□□□□□ -1.19
UME1YPL139C YIL161WP40449 235 aaKnown RBP7.62□□□□□ -1.19
UME1YPL139C STU2P46675 888 aa7.62□□□□□ -1.19
UME1YPL139C STR2P47164 639 aa7.62□□□□□ -1.19
UME1YPL139C TUB4P53378 473 aa7.62□□□□□ -1.19
UME1YPL139C YNR061CP53747 219 aa7.62□□□□□ -1.19
UME1YPL139C MTD1Q02046 320 aaKnown RBP7.62□□□□□ -1.19
UME1YPL139C BI3Q9ZZW7 517 aa7.62□□□□□ -1.19
UME1YPL139C YER152CP10356 443 aa7.61□□□□□ -1.19
UME1YPL139C HSF1P10961 833 aa7.61□□□□□ -1.19
UME1YPL139C ECM32P32644 1121 aaKnown RBP7.61□□□□□ -1.19
UME1YPL139C LSB3P43603 459 aaKnown RBP7.61□□□□□ -1.19
UME1YPL139C SPG3Q04398 127 aaPredicted RBP7.61□□□□□ -1.19
UME1YPL139C CAN1P04817 590 aa7.6□□□□□ -1.19
UME1YPL139C RPS3P05750 240 aaKnown RBP7.6□□□□□ -1.19
UME1YPL139C REV1P12689 985 aa7.6□□□□□ -1.19
UME1YPL139C KAR3P17119 729 aa7.6□□□□□ -1.19
UME1YPL139C EST1P17214 699 aaPredicted RBP7.6□□□□□ -1.19
UME1YPL139C YBR053CP38235 358 aa7.6□□□□□ -1.19
UME1YPL139C HXT5P38695 592 aa7.6□□□□□ -1.19
UME1YPL139C NMD3P38861 518 aaKnown RBP7.6□□□□□ -1.19
UME1YPL139C DOT6P40059 670 aaKnown RBP7.6□□□□□ -1.19
UME1YPL139C YER189WP40104 122 aa7.6□□□□□ -1.19
UME1YPL139C SHQ1P40486 507 aaPredicted RBP7.6□□□□□ -1.19
UME1YPL139C CHS6P40955 746 aa7.6□□□□□ -1.19
UME1YPL139C COQ6P53318 479 aa7.6□□□□□ -1.19
UME1YPL139C GYL1Q04322 720 aa7.6□□□□□ -1.19
UME1YPL139C YDR222WQ04925 415 aa7.6□□□□□ -1.19
UME1YPL139C YPR078CQ06813 372 aa7.6□□□□□ -1.19
UME1YPL139C NSE1Q07913 336 aa7.6□□□□□ -1.19
UME1YPL139C PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
UME1YPL139C SPO12P17123 173 aa7.59□□□□□ -1.19
UME1YPL139C PHO13P19881 312 aa7.59□□□□□ -1.19
UME1YPL139C RRN6P32786 894 aa7.59□□□□□ -1.19
UME1YPL139C MRPL10P36520 322 aa7.59□□□□□ -1.19
UME1YPL139C TIF5P38431 405 aaKnown RBP7.59□□□□□ -1.19
UME1YPL139C FAA4P47912 694 aaKnown RBP7.59□□□□□ -1.19
UME1YPL139C RSC1P53236 928 aa7.59□□□□□ -1.19
UME1YPL139C YDR278CQ05612 105 aa7.59□□□□□ -1.19
UME1YPL139C YOR059CQ08448 450 aaKnown RBP7.59□□□□□ -1.19
UME1YPL139C MEX67Q99257 599 aaKnown RBP7.59□□□□□ -1.19
UME1YPL139C JIP3O13555 125 aa7.59□□□□□ -1.2
UME1YPL139C RGR1P19263 1082 aa7.59□□□□□ -1.2
UME1YPL139C CAP1P28495 268 aaKnown RBP7.59□□□□□ -1.2
UME1YPL139C ECM13P38195 257 aa7.59□□□□□ -1.2
UME1YPL139C HSL7P38274 827 aa7.59□□□□□ -1.2
UME1YPL139C YIR007WP40566 764 aa7.59□□□□□ -1.2
UME1YPL139C ERG10P41338 398 aaKnown RBP7.59□□□□□ -1.2
UME1YPL139C VEL1P53058 206 aa7.59□□□□□ -1.2
UME1YPL139C CWC24P53769 259 aa7.59□□□□□ -1.2
UME1YPL139C ELP3Q02908 557 aaKnown RBP7.59□□□□□ -1.2
UME1YPL139C SEG1Q04279 960 aa7.59□□□□□ -1.2
UME1YPL139C LCB5Q06147 687 aaKnown RBP7.59□□□□□ -1.2
UME1YPL139C TOR1P35169 2470 aa7.58□□□□□ -1.2
UME1YPL139C RPP1BP10622 106 aaKnown RBP7.58□□□□□ -1.2
UME1YPL139C HCM1P25364 564 aa7.58□□□□□ -1.2
UME1YPL139C TRM112P53738 135 aaPredicted RBP7.58□□□□□ -1.2
UME1YPL139C RPN4Q03465 531 aa7.58□□□□□ -1.2
UME1YPL139C TAF9Q05027 157 aa7.58□□□□□ -1.2
UME1YPL139C SIL1Q08199 421 aa7.58□□□□□ -1.2
UME1YPL139C RRP6Q12149 733 aaKnown RBP7.58□□□□□ -1.2
UME1YPL139C ENO2P00925 437 aaKnown RBP7.57□□□□□ -1.2
UME1YPL139C PAB1P04147 577 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
UME1YPL139C FUS1P11710 512 aa7.57□□□□□ -1.2
UME1YPL139C KIN3P22209 435 aa7.57□□□□□ -1.2
UME1YPL139C MSB2P32334 1306 aa7.57□□□□□ -1.2
UME1YPL139C SRB2P34162 210 aa7.57□□□□□ -1.2
UME1YPL139C YKL050CP35736 922 aa7.57□□□□□ -1.2
UME1YPL139C NEM1P38757 446 aa7.57□□□□□ -1.2
UME1YPL139C ATG3P40344 310 aa7.57□□□□□ -1.2
UME1YPL139C GYP8P43570 497 aa7.57□□□□□ -1.2
UME1YPL139C VTC4P47075 721 aa7.57□□□□□ -1.2
UME1YPL139C YLR287CQ05881 355 aa7.57□□□□□ -1.2
UME1YPL139C APL4Q12028 832 aa7.57□□□□□ -1.2
UME1YPL139C HMI1Q12039 706 aa7.57□□□□□ -1.2
UME1YPL139C CCP1P00431 361 aa7.56□□□□□ -1.2
UME1YPL139C VMA4P22203 233 aaKnown RBP7.56□□□□□ -1.2
UME1YPL139C HSP78P33416 811 aa7.56□□□□□ -1.2
UME1YPL139C SAP190P36123 1033 aa7.56□□□□□ -1.2
UME1YPL139C JNM1P36224 373 aa7.56□□□□□ -1.2
UME1YPL139C UFE1P41834 346 aa7.56□□□□□ -1.2
UME1YPL139C SNZ3P43545 298 aa7.56□□□□□ -1.2
UME1YPL139C SNZ2P53824 298 aa7.56□□□□□ -1.2
UME1YPL139C VPS75P53853 264 aa7.56□□□□□ -1.2
UME1YPL139C INA17Q02888 182 aa7.56□□□□□ -1.2
UME1YPL139C AIM32Q04689 311 aa7.56□□□□□ -1.2
UME1YPL139C ECM38Q05902 660 aaPredicted RBP7.56□□□□□ -1.2
UME1YPL139C AEP2P22136 580 aa7.55□□□□□ -1.2
UME1YPL139C MSH2P25847 964 aa7.55□□□□□ -1.2
UME1YPL139C GPI10P30777 616 aa7.55□□□□□ -1.2
UME1YPL139C NCL1P38205 684 aaKnown RBP7.55□□□□□ -1.2
UME1YPL139C ATG12P38316 186 aa7.55□□□□□ -1.2
UME1YPL139C SET5P38890 526 aaKnown RBP7.55□□□□□ -1.2
UME1YPL139C PSY2P40164 858 aa7.55□□□□□ -1.2
UME1YPL139C TMA108P40462 946 aa7.55□□□□□ -1.2
UME1YPL139C KTR7P40504 517 aa7.55□□□□□ -1.2
UME1YPL139C NMA2P53204 395 aa7.55□□□□□ -1.2
UME1YPL139C KTR6P54070 446 aa7.55□□□□□ -1.2
UME1YPL139C YPL014WQ02606 381 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms