RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C TOR2P32600 2474 aaKnown RBP8.39□□□□□ -1.07
LSP1YPL004C ERG11P10614 530 aa8.38□□□□□ -1.07
LSP1YPL004C RAD57P25301 460 aa8.38□□□□□ -1.07
LSP1YPL004C SEC1P30619 724 aaKnown RBP8.38□□□□□ -1.07
LSP1YPL004C HSP78P33416 811 aa8.38□□□□□ -1.07
LSP1YPL004C COY1P34237 679 aa8.38□□□□□ -1.07
LSP1YPL004C LYS9P38999 446 aa8.38□□□□□ -1.07
LSP1YPL004C TMN3P40071 706 aa8.38□□□□□ -1.07
LSP1YPL004C VTC4P47075 721 aa8.38□□□□□ -1.07
LSP1YPL004C SOV1Q04748 898 aa8.38□□□□□ -1.07
LSP1YPL004C VPS5Q92331 675 aa8.38□□□□□ -1.07
LSP1YPL004C YPK1P12688 680 aaKnown RBP8.37□□□□□ -1.07
LSP1YPL004C KAR3P17119 729 aa8.37□□□□□ -1.07
LSP1YPL004C TRX1P22217 103 aaKnown RBP8.37□□□□□ -1.07
LSP1YPL004C ECM13P38195 257 aa8.37□□□□□ -1.07
LSP1YPL004C ATG12P38316 186 aa8.37□□□□□ -1.07
LSP1YPL004C SWC5P38326 303 aa8.37□□□□□ -1.07
LSP1YPL004C SPC72P39723 622 aa8.37□□□□□ -1.07
LSP1YPL004C YIL161WP40449 235 aaKnown RBP8.37□□□□□ -1.07
LSP1YPL004C YNL108CP53929 270 aa8.37□□□□□ -1.07
LSP1YPL004C ATG16Q03818 150 aa8.37□□□□□ -1.07
LSP1YPL004C SPG3Q04398 127 aaPredicted RBP8.37□□□□□ -1.07
LSP1YPL004C THI20Q08224 551 aa8.37□□□□□ -1.07
LSP1YPL004C LPX1Q12405 387 aaKnown RBP8.37□□□□□ -1.07
LSP1YPL004C ARP7Q12406 477 aa8.37□□□□□ -1.07
LSP1YPL004C PDH1Q12428 516 aaKnown RBP8.37□□□□□ -1.07
LSP1YPL004C HIS5P07172 385 aa8.36□□□□□ -1.07
LSP1YPL004C PDR1P12383 1068 aa8.36□□□□□ -1.07
LSP1YPL004C POL12P38121 705 aaPredicted RBP8.36□□□□□ -1.07
LSP1YPL004C HSL7P38274 827 aa8.36□□□□□ -1.07
LSP1YPL004C MCX1P38323 520 aaPredicted RBP8.36□□□□□ -1.07
LSP1YPL004C TCD1P38756 429 aa8.36□□□□□ -1.07
LSP1YPL004C PMC1P38929 1173 aaPredicted RBP8.36□□□□□ -1.07
LSP1YPL004C YER189WP40104 122 aa8.36□□□□□ -1.07
LSP1YPL004C TMA108P40462 946 aa8.36□□□□□ -1.07
LSP1YPL004C BTN2P53286 410 aa8.36□□□□□ -1.07
LSP1YPL004C JJJ1P53863 590 aa8.36□□□□□ -1.07
LSP1YPL004C ECM38Q05902 660 aaPredicted RBP8.36□□□□□ -1.07
LSP1YPL004C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
LSP1YPL004C IRC10Q08118 586 aa8.36□□□□□ -1.07
LSP1YPL004C YRR1Q12172 810 aa8.36□□□□□ -1.07
LSP1YPL004C ENO2P00925 437 aaKnown RBP8.35□□□□□ -1.07
LSP1YPL004C PUP3P25451 205 aaKnown RBP8.35□□□□□ -1.07
LSP1YPL004C STO1P34160 861 aaKnown RBP8.35□□□□□ -1.07
LSP1YPL004C HIS2P38635 335 aa8.35□□□□□ -1.07
LSP1YPL004C NMD3P38861 518 aaKnown RBP8.35□□□□□ -1.07
LSP1YPL004C ERP2P39704 215 aa8.35□□□□□ -1.07
LSP1YPL004C YIL054WP40524 105 aa8.35□□□□□ -1.07
LSP1YPL004C MRX6P48564 524 aa8.35□□□□□ -1.07
LSP1YPL004C KAP114P53067 1004 aa8.35□□□□□ -1.07
LSP1YPL004C PEX31P53203 462 aa8.35□□□□□ -1.07
LSP1YPL004C YGR283CP53336 341 aaPredicted RBP8.35□□□□□ -1.07
LSP1YPL004C SFB2P53953 876 aa8.35□□□□□ -1.07
LSP1YPL004C ELP3Q02908 557 aaKnown RBP8.35□□□□□ -1.07
LSP1YPL004C GYL1Q04322 720 aa8.35□□□□□ -1.07
LSP1YPL004C SVS1Q12254 260 aa8.35□□□□□ -1.07
LSP1YPL004C RPS9AO13516 197 aaKnown RBP8.34□□□□□ -1.07
LSP1YPL004C SGF29P25554 259 aa8.34□□□□□ -1.07
LSP1YPL004C YIH1P25637 258 aa8.34□□□□□ -1.07
LSP1YPL004C DBF4P32325 704 aa8.34□□□□□ -1.07
LSP1YPL004C SEG2P34250 1132 aa8.34□□□□□ -1.07
LSP1YPL004C RRT2P38332 387 aa8.34□□□□□ -1.07
LSP1YPL004C SEC9P40357 651 aa8.34□□□□□ -1.07
LSP1YPL004C ART5P53244 586 aaKnown RBP8.34□□□□□ -1.07
LSP1YPL004C KTR6P54070 446 aa8.34□□□□□ -1.07
LSP1YPL004C CDC55Q00362 526 aa8.34□□□□□ -1.07
LSP1YPL004C TOF2Q02208 771 aa8.34□□□□□ -1.07
LSP1YPL004C YPL014WQ02606 381 aa8.34□□□□□ -1.07
LSP1YPL004C PIR3Q03180 325 aa8.34□□□□□ -1.07
LSP1YPL004C NGL3Q03210 505 aa8.34□□□□□ -1.07
LSP1YPL004C YDL073WQ07454 984 aa8.34□□□□□ -1.07
LSP1YPL004C YLR001CQ07895 862 aa8.34□□□□□ -1.07
LSP1YPL004C PAB1P04147 577 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
LSP1YPL004C RPS14AP06367 137 aaKnown RBP8.33□□□□□ -1.08
LSP1YPL004C CKI1P20485 582 aa8.33□□□□□ -1.08
LSP1YPL004C SIR1P21691 654 aa8.33□□□□□ -1.08
LSP1YPL004C NEM1P38757 446 aa8.33□□□□□ -1.08
LSP1YPL004C RPS14BP39516 138 aaKnown RBP8.33□□□□□ -1.08
LSP1YPL004C PRM9P39551 298 aa8.33□□□□□ -1.08
LSP1YPL004C SAP185P40856 1058 aa8.33□□□□□ -1.08
LSP1YPL004C UFE1P41834 346 aa8.33□□□□□ -1.08
LSP1YPL004C OSW7P43611 510 aa8.33□□□□□ -1.08
LSP1YPL004C RTT101P47050 842 aa8.33□□□□□ -1.08
LSP1YPL004C ATH1P48016 1211 aa8.33□□□□□ -1.08
LSP1YPL004C COQ6P53318 479 aa8.33□□□□□ -1.08
LSP1YPL004C COP1P53622 1201 aaKnown RBP8.33□□□□□ -1.08
LSP1YPL004C YNL247WP53852 767 aaKnown RBP8.33□□□□□ -1.08
LSP1YPL004C YNL144CP53907 740 aa8.33□□□□□ -1.08
LSP1YPL004C SND1Q04007 877 aa8.33□□□□□ -1.08
LSP1YPL004C YHM2Q04013 314 aa8.33□□□□□ -1.08
LSP1YPL004C SEG1Q04279 960 aa8.33□□□□□ -1.08
LSP1YPL004C TMN2Q04562 672 aa8.33□□□□□ -1.08
LSP1YPL004C IVY1Q04934 453 aa8.33□□□□□ -1.08
LSP1YPL004C NSE1Q07913 336 aa8.33□□□□□ -1.08
LSP1YPL004C YOR387CQ08910 206 aa8.33□□□□□ -1.08
LSP1YPL004C FLC1Q08967 793 aa8.33□□□□□ -1.08
LSP1YPL004C THI21Q08975 551 aa8.33□□□□□ -1.08
LSP1YPL004C REV1P12689 985 aa8.32□□□□□ -1.08
LSP1YPL004C PSE1P32337 1089 aaKnown RBP8.32□□□□□ -1.08
LSP1YPL004C SRB4P32569 687 aa8.32□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms