RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C PDR1P12383 1068 aa7.69□□□□□ -1.18
RUP1YOR138C VPS34P22543 875 aa7.69□□□□□ -1.18
RUP1YOR138C KIN82P25341 720 aa7.69□□□□□ -1.18
RUP1YOR138C CDC20P26309 610 aa7.69□□□□□ -1.18
RUP1YOR138C EFT1P32324 842 aaKnown RBP7.69□□□□□ -1.18
RUP1YOR138C TGL4P36165 910 aa7.69□□□□□ -1.18
RUP1YOR138C DPH1P40487 425 aaKnown RBP7.69□□□□□ -1.18
RUP1YOR138C FET4P40988 552 aa7.69□□□□□ -1.18
RUP1YOR138C NOP15P53927 220 aaPredicted RBP7.69□□□□□ -1.18
RUP1YOR138C RPM2Q02773 1202 aa7.69□□□□□ -1.18
RUP1YOR138C YLR455WQ06188 304 aa7.69□□□□□ -1.18
RUP1YOR138C YRR1Q12172 810 aa7.69□□□□□ -1.18
RUP1YOR138C GIS3Q12418 502 aa7.69□□□□□ -1.18
RUP1YOR138C SNA3P14359 133 aa7.68□□□□□ -1.18
RUP1YOR138C SEC1P30619 724 aaKnown RBP7.68□□□□□ -1.18
RUP1YOR138C YKR078WP36158 585 aaKnown RBP7.68□□□□□ -1.18
RUP1YOR138C TVP38P36164 337 aa7.68□□□□□ -1.18
RUP1YOR138C YDR089WP38966 869 aa7.68□□□□□ -1.18
RUP1YOR138C PRK1P40494 810 aa7.68□□□□□ -1.18
RUP1YOR138C YJL107CP42947 387 aa7.68□□□□□ -1.18
RUP1YOR138C SNZ3P43545 298 aa7.68□□□□□ -1.18
RUP1YOR138C RPS0BP46654 252 aaKnown RBP7.68□□□□□ -1.18
RUP1YOR138C MRM2P53123 320 aa7.68□□□□□ -1.18
RUP1YOR138C UTP8P53276 713 aaKnown RBP7.68□□□□□ -1.18
RUP1YOR138C SNZ2P53824 298 aa7.68□□□□□ -1.18
RUP1YOR138C ELP3Q02908 557 aaKnown RBP7.68□□□□□ -1.18
RUP1YOR138C TRS130Q03660 1102 aa7.68□□□□□ -1.18
RUP1YOR138C ATG20Q07528 640 aa7.68□□□□□ -1.18
RUP1YOR138C YLL058WQ12198 575 aa7.68□□□□□ -1.18
RUP1YOR138C STB3Q12427 513 aa7.68□□□□□ -1.18
RUP1YOR138C GAL2P13181 574 aa7.68□□□□□ -1.18
RUP1YOR138C MEF1P25039 761 aa7.68□□□□□ -1.18
RUP1YOR138C RAD14P28519 371 aa7.68□□□□□ -1.18
RUP1YOR138C CUE2P36075 443 aaKnown RBP7.68□□□□□ -1.18
RUP1YOR138C FMP33P46998 180 aa7.68□□□□□ -1.18
RUP1YOR138C SHE10P53075 577 aa7.68□□□□□ -1.18
RUP1YOR138C PUS2P53167 370 aa7.68□□□□□ -1.18
RUP1YOR138C YGR117CP53270 476 aa7.68□□□□□ -1.18
RUP1YOR138C BCP1Q06338 283 aa7.68□□□□□ -1.18
RUP1YOR138C MEU1Q07938 337 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
RUP1YOR138C GPM3Q12326 303 aa7.68□□□□□ -1.18
RUP1YOR138C YAK1P14680 807 aa7.67□□□□□ -1.18
RUP1YOR138C RAD51P25454 400 aa7.67□□□□□ -1.18
RUP1YOR138C PUP2P32379 260 aa7.67□□□□□ -1.18
RUP1YOR138C CDC27P38042 758 aa7.67□□□□□ -1.18
RUP1YOR138C LAM1P38851 1228 aa7.67□□□□□ -1.18
RUP1YOR138C FRT2P39734 528 aa7.67□□□□□ -1.18
RUP1YOR138C HMF1P40037 129 aaKnown RBP7.67□□□□□ -1.18
RUP1YOR138C ACF4P47129 309 aa7.67□□□□□ -1.18
RUP1YOR138C SXM1Q04175 944 aaKnown RBP7.67□□□□□ -1.18
RUP1YOR138C YPR202WQ08993 238 aa7.67□□□□□ -1.18
RUP1YOR138C GAL10P04397 699 aa7.66□□□□□ -1.18
RUP1YOR138C RPL4AP10664 362 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C KEX2P13134 814 aa7.66□□□□□ -1.18
RUP1YOR138C AST1P35183 429 aa7.66□□□□□ -1.18
RUP1YOR138C SWC5P38326 303 aa7.66□□□□□ -1.18
RUP1YOR138C CKB2P38930 258 aa7.66□□□□□ -1.18
RUP1YOR138C SCS2P40075 244 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C PDS1P40316 373 aaPredicted RBP7.66□□□□□ -1.18
RUP1YOR138C RPT2P40327 437 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C PEP8P40335 379 aa7.66□□□□□ -1.18
RUP1YOR138C YIL054WP40524 105 aa7.66□□□□□ -1.18
RUP1YOR138C ZAP1P47043 880 aa7.66□□□□□ -1.18
RUP1YOR138C MAD3P47074 515 aa7.66□□□□□ -1.18
RUP1YOR138C RPL4BP49626 362 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C RTA1P53047 317 aa7.66□□□□□ -1.18
RUP1YOR138C NMA111P53920 997 aa7.66□□□□□ -1.18
RUP1YOR138C RSA3Q05942 220 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C YDR461C-AQ2V2P7 80 aa7.66□□□□□ -1.18
RUP1YOR138C PDC5P16467 563 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C EST1P17214 699 aaPredicted RBP7.66□□□□□ -1.18
RUP1YOR138C TKL1P23254 680 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C GLC3P32775 704 aa7.66□□□□□ -1.18
RUP1YOR138C APN2P38207 520 aa7.66□□□□□ -1.18
RUP1YOR138C YEL025CP39991 1188 aa7.66□□□□□ -1.18
RUP1YOR138C CHS6P40955 746 aa7.66□□□□□ -1.18
RUP1YOR138C VTC4P47075 721 aa7.66□□□□□ -1.18
RUP1YOR138C TAH11P47112 604 aa7.66□□□□□ -1.18
RUP1YOR138C MIG2P53035 382 aa7.66□□□□□ -1.18
RUP1YOR138C LSC1P53598 329 aaKnown RBP7.66□□□□□ -1.18
RUP1YOR138C CDC55Q00362 526 aa7.66□□□□□ -1.18
RUP1YOR138C SLD5Q03406 294 aa7.66□□□□□ -1.18
RUP1YOR138C YPR097WQ06839 1073 aa7.66□□□□□ -1.18
RUP1YOR138C ERP3Q12403 225 aa7.66□□□□□ -1.18
RUP1YOR138C GFD2P25370 566 aaKnown RBP7.65□□□□□ -1.18
RUP1YOR138C PER1P25625 357 aa7.65□□□□□ -1.18
RUP1YOR138C HXT3P32466 567 aaKnown RBP7.65□□□□□ -1.18
RUP1YOR138C OCT1P35999 772 aa7.65□□□□□ -1.18
RUP1YOR138C ECM4P36156 370 aa7.65□□□□□ -1.18
RUP1YOR138C PPX1P38698 397 aa7.65□□□□□ -1.18
RUP1YOR138C STL1P39932 569 aa7.65□□□□□ -1.18
RUP1YOR138C SAH1P39954 449 aaKnown RBP7.65□□□□□ -1.18
RUP1YOR138C YGL036WP53185 909 aaPredicted RBP7.65□□□□□ -1.18
RUP1YOR138C HST2P53686 357 aa7.65□□□□□ -1.18
RUP1YOR138C IST1P53843 298 aaPredicted RBP7.65□□□□□ -1.18
RUP1YOR138C RNY1Q02933 434 aaKnown RBP7.65□□□□□ -1.18
RUP1YOR138C ZPS1Q12512 249 aa7.65□□□□□ -1.18
RUP1YOR138C CSR2Q12734 1121 aa7.65□□□□□ -1.18
RUP1YOR138C IMA3P0CW40 589 aa7.64□□□□□ -1.19
RUP1YOR138C IMA4P0CW41 589 aa7.64□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms