RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	GUT1	P32190	709 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	INA17	Q02888	182 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	THI20	Q08224	551 aa		11.17	□□□□□ -0.62
YSP3	YOR003W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
YSP3	YOR003W	ERG11	P10614	530 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	SEC1	P30619	724 aa	Known RBP	11.16	□□□□□ -0.62
YSP3	YOR003W	NMD3	P38861	518 aa	Known RBP	11.16	□□□□□ -0.62
YSP3	YOR003W	TMN3	P40071	706 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	PSY2	P40164	858 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	SEC9	P40357	651 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	JJJ1	P53863	590 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	SYH1	Q02875	849 aa	Known RBP	11.16	□□□□□ -0.62
YSP3	YOR003W	YMR018W	Q04364	514 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	YDR278C	Q05612	105 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	APC5	Q08683	685 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	LPX1	Q12405	387 aa	Known RBP	11.16	□□□□□ -0.62
YSP3	YOR003W	ARP7	Q12406	477 aa		11.16	□□□□□ -0.62
YSP3	YOR003W	PUT4	P15380	627 aa		11.15	□□□□□ -0.62
YSP3	YOR003W	SPC110	P32380	944 aa		11.15	□□□□□ -0.62
YSP3	YOR003W	LSB6	P42951	607 aa		11.15	□□□□□ -0.62
YSP3	YOR003W	DIG1	Q03063	452 aa	Known RBP	11.15	□□□□□ -0.62
YSP3	YOR003W	YHM2	Q04013	314 aa		11.15	□□□□□ -0.62
YSP3	YOR003W	YOR387C	Q08910	206 aa		11.15	□□□□□ -0.62
YSP3	YOR003W	SGF29	P25554	259 aa		11.14	□□□□□ -0.63
YSP3	YOR003W	SEG2	P34250	1132 aa		11.14	□□□□□ -0.63
YSP3	YOR003W	POL12	P38121	705 aa	Predicted RBP	11.14	□□□□□ -0.63
YSP3	YOR003W	YIL161W	P40449	235 aa	Known RBP	11.14	□□□□□ -0.63
YSP3	YOR003W	ASG1	P40467	964 aa		11.14	□□□□□ -0.63
YSP3	YOR003W	YGR283C	P53336	341 aa	Predicted RBP	11.14	□□□□□ -0.63
YSP3	YOR003W	DAS2	Q12084	232 aa		11.14	□□□□□ -0.63
YSP3	YOR003W	SEC23	P15303	768 aa	Known RBP	11.13	□□□□□ -0.63
YSP3	YOR003W	ABD1	P32783	436 aa	Predicted RBP	11.13	□□□□□ -0.63
YSP3	YOR003W	BLI1	P35727	113 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	MED6	P38782	295 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	SAP185	P40856	1058 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	ALF1	P53904	254 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	CTR9	P89105	1077 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	TMN2	Q04562	672 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	IRC10	Q08118	586 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	LCB4	Q12246	624 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	PDH1	Q12428	516 aa	Known RBP	11.13	□□□□□ -0.63
YSP3	YOR003W	VPS5	Q92331	675 aa		11.13	□□□□□ -0.63
YSP3	YOR003W	CCP1	P00431	361 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	TRX1	P22217	103 aa	Known RBP	11.12	□□□□□ -0.63
YSP3	YOR003W	CAP1	P28495	268 aa	Known RBP	11.12	□□□□□ -0.63
YSP3	YOR003W	DBF4	P32325	704 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	STO1	P34160	861 aa	Known RBP	11.12	□□□□□ -0.63
YSP3	YOR003W	RRT2	P38332	387 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	HIS2	P38635	335 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	TCD1	P38756	429 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	EFM4	P40516	257 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	YIL054W	P40524	105 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	BRO1	P48582	844 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	COQ6	P53318	479 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	KTR6	P54070	446 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	BET4	Q00618	327 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	PIR3	Q03180	325 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	RKM2	Q03942	479 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	WSC3	Q12215	556 aa		11.12	□□□□□ -0.63
YSP3	YOR003W	HSP78	P33416	811 aa		11.11	□□□□□ -0.63
YSP3	YOR003W	KHA1	P40309	873 aa		11.11	□□□□□ -0.63
YSP3	YOR003W	UFE1	P41834	346 aa		11.11	□□□□□ -0.63
YSP3	YOR003W	SFB2	P53953	876 aa		11.11	□□□□□ -0.63
YSP3	YOR003W	SXM1	Q04175	944 aa	Known RBP	11.11	□□□□□ -0.63
YSP3	YOR003W	PMT7	Q06644	662 aa		11.11	□□□□□ -0.63
YSP3	YOR003W	RPS14A	P06367	137 aa	Known RBP	11.1	□□□□□ -0.63
YSP3	YOR003W	YIH1	P25637	258 aa		11.1	□□□□□ -0.63
YSP3	YOR003W	HXT1	P32465	570 aa		11.1	□□□□□ -0.63
YSP3	YOR003W	ECM13	P38195	257 aa		11.1	□□□□□ -0.63
YSP3	YOR003W	RPS14B	P39516	138 aa	Known RBP	11.1	□□□□□ -0.63
YSP3	YOR003W	AIM32	Q04689	311 aa		11.1	□□□□□ -0.63
YSP3	YOR003W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	11.1	□□□□□ -0.63	RIP-Chip
YSP3	YOR003W	ADE3	P07245	946 aa	Known RBP	11.09	□□□□□ -0.63
YSP3	YOR003W	MCX1	P38323	520 aa	Predicted RBP	11.09	□□□□□ -0.63
YSP3	YOR003W	SWC5	P38326	303 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	URA8	P38627	578 aa	Predicted RBP	11.09	□□□□□ -0.63
YSP3	YOR003W	LYS9	P38999	446 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	TMA108	P40462	946 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	CNN1	P43618	361 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	KAP114	P53067	1004 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	TRM112	P53738	135 aa	Predicted RBP	11.09	□□□□□ -0.63
YSP3	YOR003W	NOG2	P53742	486 aa	Known RBP	11.09	□□□□□ -0.63
YSP3	YOR003W	ATG16	Q03818	150 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	IVY1	Q04934	453 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	YOL036W	Q08206	761 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	SVS1	Q12254	260 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	PSE1	P32337	1089 aa	Known RBP	11.09	□□□□□ -0.63
YSP3	YOR003W	DCW1	P36091	449 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	ATG12	P38316	186 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	SPC72	P39723	622 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	CDC55	Q00362	526 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	SEG1	Q04279	960 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	ERV41	Q04651	352 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	THI21	Q08975	551 aa		11.09	□□□□□ -0.63
YSP3	YOR003W	ENO2	P00925	437 aa	Known RBP	11.08	□□□□□ -0.64
YSP3	YOR003W	HIS5	P07172	385 aa		11.08	□□□□□ -0.64
YSP3	YOR003W	PET123	P17558	318 aa		11.08	□□□□□ -0.64
YSP3	YOR003W	CHS6	P40955	746 aa		11.08	□□□□□ -0.64
YSP3	YOR003W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.08	□□□□□ -0.64	not detected
YSP3	YOR003W	APT1	P49435	187 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms