RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W YPS7Q06325 596 aa4.27□□□□□ -1.73
VPS27YNR006W CSR1Q06705 408 aaKnown RBP4.27□□□□□ -1.73
VPS27YNR006W YPL277CQ08989 487 aa4.27□□□□□ -1.73
VPS27YNR006W DBP10Q12389 995 aaKnown RBP4.27□□□□□ -1.73
VPS27YNR006W SMC6Q12749 1114 aa4.27□□□□□ -1.73
VPS27YNR006W PRC1P00729 532 aa4.26□□□□□ -1.73
VPS27YNR006W ACO1P19414 778 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
VPS27YNR006W SWI4P25302 1093 aaKnown RBP4.26□□□□□ -1.73
VPS27YNR006W SGF29P25554 259 aa4.26□□□□□ -1.73
VPS27YNR006W APL1P27351 700 aa4.26□□□□□ -1.73
VPS27YNR006W RPD3P32561 433 aa4.26□□□□□ -1.73
VPS27YNR006W MTH1P35198 433 aa4.26□□□□□ -1.73
VPS27YNR006W BYE1P36106 594 aa4.26□□□□□ -1.73
VPS27YNR006W ESL2P36168 1195 aa4.26□□□□□ -1.73
VPS27YNR006W RXT2P38255 430 aa4.26□□□□□ -1.73
VPS27YNR006W MEP1P40260 492 aa4.26□□□□□ -1.73
VPS27YNR006W SET2P46995 733 aaKnown RBP4.26□□□□□ -1.73
VPS27YNR006W GPI8P49018 411 aa4.26□□□□□ -1.73
VPS27YNR006W MNT2P53059 558 aa4.26□□□□□ -1.73
VPS27YNR006W MSC2Q03455 724 aa4.26□□□□□ -1.73
VPS27YNR006W SIZ1Q04195 904 aa4.26□□□□□ -1.73
VPS27YNR006W PGC1Q08959 321 aa4.26□□□□□ -1.73
VPS27YNR006W SPT7P35177 1332 aa4.26□□□□□ -1.73
VPS27YNR006W POL3P15436 1097 aa4.26□□□□□ -1.73
VPS27YNR006W PDX1P16451 410 aa4.26□□□□□ -1.73
VPS27YNR006W BRF1P29056 596 aa4.26□□□□□ -1.73
VPS27YNR006W FRD1P32614 470 aaKnown RBP4.26□□□□□ -1.73
VPS27YNR006W YKR073CP36153 106 aa4.26□□□□□ -1.73
VPS27YNR006W CCT3P39077 534 aaKnown RBP4.26□□□□□ -1.73
VPS27YNR006W BFA1P47113 574 aa4.26□□□□□ -1.73
VPS27YNR006W SAP4P53036 818 aa4.26□□□□□ -1.73
VPS27YNR006W BTN2P53286 410 aa4.26□□□□□ -1.73
VPS27YNR006W YNR071CP53757 342 aa4.26□□□□□ -1.73
VPS27YNR006W ORC3P54790 616 aa4.26□□□□□ -1.73
VPS27YNR006W YDR131CQ03899 556 aa4.26□□□□□ -1.73
VPS27YNR006W YCG1Q06680 1035 aa4.26□□□□□ -1.73
VPS27YNR006W STP4Q07351 490 aa4.26□□□□□ -1.73
VPS27YNR006W IWR1Q07532 353 aaPredicted RBP4.26□□□□□ -1.73
VPS27YNR006W RPS9AO13516 197 aaKnown RBP4.25□□□□□ -1.73
VPS27YNR006W RED1P14291 827 aa4.25□□□□□ -1.73
VPS27YNR006W CKA1P15790 372 aa4.25□□□□□ -1.73
VPS27YNR006W AAD3P25612 363 aa4.25□□□□□ -1.73
VPS27YNR006W IMG2P25642 146 aaPredicted RBP4.25□□□□□ -1.73
VPS27YNR006W DGR2P32330 852 aa4.25□□□□□ -1.73
VPS27YNR006W MIP6P38760 659 aaKnown RBP4.25□□□□□ -1.73
VPS27YNR006W SSP120P39931 234 aaKnown RBP4.25□□□□□ -1.73
VPS27YNR006W CTF4Q01454 927 aa4.25□□□□□ -1.73
VPS27YNR006W TIM50Q02776 476 aa4.25□□□□□ -1.73
VPS27YNR006W PCD1Q12524 340 aa4.25□□□□□ -1.73
VPS27YNR006W MET17P06106 444 aa4.24□□□□□ -1.73
VPS27YNR006W KIN2P13186 1147 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W BET2P20133 325 aa4.24□□□□□ -1.73
VPS27YNR006W IME1P21190 360 aa4.24□□□□□ -1.73
VPS27YNR006W ORC2P32833 620 aa4.24□□□□□ -1.73
VPS27YNR006W TYE7P33122 291 aaPredicted RBP4.24□□□□□ -1.73
VPS27YNR006W YKR075CP36155 307 aa4.24□□□□□ -1.73
VPS27YNR006W POA1P38218 177 aa4.24□□□□□ -1.73
VPS27YNR006W YLF2P38746 405 aa4.24□□□□□ -1.73
VPS27YNR006W PSP1P50896 841 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W HOS2P53096 452 aaPredicted RBP4.24□□□□□ -1.73
VPS27YNR006W GPD1Q00055 391 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W YMR155WQ03795 547 aa4.24□□□□□ -1.73
VPS27YNR006W RSM24Q03976 319 aa4.24□□□□□ -1.73
VPS27YNR006W MED7Q08278 222 aa4.24□□□□□ -1.73
VPS27YNR006W YPL191CQ08930 360 aa4.24□□□□□ -1.73
VPS27YNR006W TY1B-AO13527 1196 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W ARG3P05150 338 aa4.24□□□□□ -1.73
VPS27YNR006W MIS1P09440 975 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W RPL19AP0CX82 189 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W RPL19BP0CX83 189 aaPredicted RBP4.24□□□□□ -1.73
VPS27YNR006W SAS3P34218 831 aa4.24□□□□□ -1.73
VPS27YNR006W NPR3P38742 1146 aa4.24□□□□□ -1.73
VPS27YNR006W LTP1P40347 161 aa4.24□□□□□ -1.73
VPS27YNR006W JEM1P40358 645 aa4.24□□□□□ -1.73
VPS27YNR006W ATP22P50273 684 aaPredicted RBP4.24□□□□□ -1.73
VPS27YNR006W DUS1P53759 423 aaKnown RBP4.24□□□□□ -1.73
VPS27YNR006W SSL1Q04673 461 aaPredicted RBP4.24□□□□□ -1.73
VPS27YNR006W YLR345WQ06137 509 aa4.24□□□□□ -1.73
VPS27YNR006W CDA1Q06702 301 aa4.24□□□□□ -1.73
VPS27YNR006W GPR1Q12361 961 aa4.24□□□□□ -1.73
VPS27YNR006W ADE3P07245 946 aaKnown RBP4.23□□□□□ -1.73
VPS27YNR006W CMP2P14747 604 aa4.23□□□□□ -1.73
VPS27YNR006W SRP101P32916 621 aa4.23□□□□□ -1.73
VPS27YNR006W TAF5P38129 798 aa4.23□□□□□ -1.73
VPS27YNR006W FMP10P40098 244 aa4.23□□□□□ -1.73
VPS27YNR006W SIP4P46954 829 aa4.23□□□□□ -1.73
VPS27YNR006W RAI1P53063 387 aaKnown RBP4.23□□□□□ -1.73
VPS27YNR006W RCR2Q03446 210 aaKnown RBP4.23□□□□□ -1.73
VPS27YNR006W YMR210WQ03649 449 aa4.23□□□□□ -1.73
VPS27YNR006W ASM4Q05166 528 aa4.23□□□□□ -1.73
VPS27YNR006W FBP1P09201 348 aa4.22□□□□□ -1.73
VPS27YNR006W RIT1P23796 513 aa4.22□□□□□ -1.73
VPS27YNR006W ROX1P25042 368 aa4.22□□□□□ -1.73
VPS27YNR006W YKL100CP34248 587 aa4.22□□□□□ -1.73
VPS27YNR006W CTF13P35203 478 aa4.22□□□□□ -1.73
VPS27YNR006W TOS1P38288 455 aa4.22□□□□□ -1.73
VPS27YNR006W UME6P39001 836 aa4.22□□□□□ -1.73
VPS27YNR006W CIR1P42940 261 aa4.22□□□□□ -1.73
VPS27YNR006W LSB3P43603 459 aaKnown RBP4.22□□□□□ -1.73
VPS27YNR006W FOL2P51601 243 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms