RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A LYS9P38999 446 aa4.42□□□□□ -1.7
YSF3YNL138W-A NUG1P40010 520 aaKnown RBP4.42□□□□□ -1.7
YSF3YNL138W-A YNL195CP40168 261 aa4.42□□□□□ -1.7
YSF3YNL138W-A RET2P43621 546 aa4.42□□□□□ -1.7
YSF3YNL138W-A SET2P46995 733 aaKnown RBP4.42□□□□□ -1.7
YSF3YNL138W-A YJL163CP46996 555 aa4.42□□□□□ -1.7
YSF3YNL138W-A YJR039WP47107 1121 aa4.42□□□□□ -1.7
YSF3YNL138W-A COX18P53239 316 aa4.42□□□□□ -1.7
YSF3YNL138W-A RGC1Q06108 1083 aaKnown RBP4.42□□□□□ -1.7
YSF3YNL138W-A ATG11Q12527 1178 aa4.42□□□□□ -1.7
YSF3YNL138W-A HRP1Q99383 534 aaKnown RBP4.42□□□□□ -1.7
YSF3YNL138W-A TAO3P40468 2376 aa4.42□□□□□ -1.7
YSF3YNL138W-A UTP10P42945 1769 aaKnown RBP4.42□□□□□ -1.7
YSF3YNL138W-A PYC1P11154 1178 aaKnown RBP4.41□□□□□ -1.7
YSF3YNL138W-A TRZ1P36159 838 aaPredicted RBP4.41□□□□□ -1.7
YSF3YNL138W-A APT2P36973 181 aa4.41□□□□□ -1.7
YSF3YNL138W-A AKL1P38080 1108 aaKnown RBP4.41□□□□□ -1.7
YSF3YNL138W-A BCD1P38772 366 aa4.41□□□□□ -1.7
YSF3YNL138W-A YHR202WP38887 602 aa4.41□□□□□ -1.7
YSF3YNL138W-A YEN1P40028 759 aa4.41□□□□□ -1.7
YSF3YNL138W-A GID8P40208 455 aa4.41□□□□□ -1.7
YSF3YNL138W-A GPP1P41277 250 aaKnown RBP4.41□□□□□ -1.7
YSF3YNL138W-A BAP3P41815 604 aa4.41□□□□□ -1.7
YSF3YNL138W-A MUK1Q02866 612 aa4.41□□□□□ -1.7
YSF3YNL138W-A CTK1Q03957 528 aaKnown RBP4.41□□□□□ -1.7
YSF3YNL138W-A ISA1Q07821 250 aaPredicted RBP4.41□□□□□ -1.7
YSF3YNL138W-A RPS9BP05755 195 aaKnown RBP4.4□□□□□ -1.71
YSF3YNL138W-A RNR1P21524 888 aaKnown RBP4.4□□□□□ -1.71
YSF3YNL138W-A GRX4P32642 244 aa4.4□□□□□ -1.71
YSF3YNL138W-A FMO1P38866 432 aa4.4□□□□□ -1.71
YSF3YNL138W-A PEA2P40091 420 aa4.4□□□□□ -1.71
YSF3YNL138W-A YGR153WP48238 217 aa4.4□□□□□ -1.71
YSF3YNL138W-A UBC11P52492 156 aa4.4□□□□□ -1.71
YSF3YNL138W-A GPD1Q00055 391 aaKnown RBP4.4□□□□□ -1.71
YSF3YNL138W-A CTF4Q01454 927 aa4.4□□□□□ -1.71
YSF3YNL138W-A REC102Q02721 264 aa4.4□□□□□ -1.71
YSF3YNL138W-A FAP7Q12055 197 aaPredicted RBP4.4□□□□□ -1.71
YSF3YNL138W-A RPS21BQ3E754 87 aaKnown RBP4.4□□□□□ -1.71
YSF3YNL138W-A ECM3Q99252 613 aa4.4□□□□□ -1.71
YSF3YNL138W-A SSM4P40318 1319 aa4.4□□□□□ -1.71
YSF3YNL138W-A TSR4P25040 408 aa4.39□□□□□ -1.71
YSF3YNL138W-A BEM4P39011 633 aa4.39□□□□□ -1.71
YSF3YNL138W-A OAF1P39720 1047 aaPredicted RBP4.39□□□□□ -1.71
YSF3YNL138W-A GET2P40056 285 aa4.39□□□□□ -1.71
YSF3YNL138W-A STB4P50104 949 aa4.39□□□□□ -1.71
YSF3YNL138W-A HMO1Q03973 246 aaKnown RBP4.39□□□□□ -1.71
YSF3YNL138W-A HFD1Q04458 532 aa4.39□□□□□ -1.71
YSF3YNL138W-A GSC2P40989 1895 aa4.39□□□□□ -1.71
YSF3YNL138W-A IMG2P25642 146 aaPredicted RBP4.38□□□□□ -1.71
YSF3YNL138W-A MVD1P32377 396 aaKnown RBP4.38□□□□□ -1.71
YSF3YNL138W-A HIR1P32479 840 aa4.38□□□□□ -1.71
YSF3YNL138W-A YKU70P32807 602 aa4.38□□□□□ -1.71
YSF3YNL138W-A HXT6P39003 570 aaKnown RBP4.38□□□□□ -1.71
YSF3YNL138W-A HXT7P39004 570 aa4.38□□□□□ -1.71
YSF3YNL138W-A CCT3P39077 534 aaKnown RBP4.38□□□□□ -1.71
YSF3YNL138W-A CCT5P40413 562 aaKnown RBP4.38□□□□□ -1.71
YSF3YNL138W-A NOP9P47077 666 aaKnown RBP4.38□□□□□ -1.71
YSF3YNL138W-A BFA1P47113 574 aa4.38□□□□□ -1.71
YSF3YNL138W-A YGL081WP53156 320 aa4.38□□□□□ -1.71
YSF3YNL138W-A ECM9Q02202 377 aa4.38□□□□□ -1.71
YSF3YNL138W-A ERO1Q03103 563 aa4.38□□□□□ -1.71
YSF3YNL138W-A YLR407WQ06070 228 aa4.38□□□□□ -1.71
YSF3YNL138W-A SGO1Q08490 590 aa4.38□□□□□ -1.71
YSF3YNL138W-A YTM1Q12024 460 aaPredicted RBP4.38□□□□□ -1.71
YSF3YNL138W-A LEU2P04173 364 aaPredicted RBP4.37□□□□□ -1.71
YSF3YNL138W-A HRB1P38922 454 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
YSF3YNL138W-A NUP60P39705 539 aa4.37□□□□□ -1.71
YSF3YNL138W-A FMP52P40008 231 aa4.37□□□□□ -1.71
YSF3YNL138W-A GZF3P42944 551 aaKnown RBP4.37□□□□□ -1.71
YSF3YNL138W-A VPS36Q06696 566 aa4.37□□□□□ -1.71
YSF3YNL138W-A SEC65P29478 273 aa4.36□□□□□ -1.71
YSF3YNL138W-A MOH1P38191 138 aa4.36□□□□□ -1.71
YSF3YNL138W-A PCL5P38794 229 aa4.36□□□□□ -1.71
YSF3YNL138W-A SFB3P38810 929 aa4.36□□□□□ -1.71
YSF3YNL138W-A RSC8P43609 557 aaKnown RBP4.36□□□□□ -1.71
YSF3YNL138W-A MNN11P46985 422 aaKnown RBP4.36□□□□□ -1.71
YSF3YNL138W-A PAN2P53010 1115 aaPredicted RBP4.36□□□□□ -1.71
YSF3YNL138W-A TIM50Q02776 476 aa4.36□□□□□ -1.71
YSF3YNL138W-A YMR210WQ03649 449 aa4.36□□□□□ -1.71
YSF3YNL138W-A YHM2Q04013 314 aa4.36□□□□□ -1.71
YSF3YNL138W-A OMS1Q06668 471 aa4.36□□□□□ -1.71
YSF3YNL138W-A VHS3Q08438 674 aa4.36□□□□□ -1.71
YSF3YNL138W-A ACF2Q12168 779 aa4.36□□□□□ -1.71
YSF3YNL138W-A CSR2Q12734 1121 aa4.36□□□□□ -1.71
YSF3YNL138W-A HKR1P41809 1802 aa4.36□□□□□ -1.71
YSF3YNL138W-A SWI6P09959 803 aa4.35□□□□□ -1.71
YSF3YNL138W-A RPS21AP0C0V8 87 aaKnown RBP4.35□□□□□ -1.71
YSF3YNL138W-A OSM1P21375 501 aaKnown RBP4.35□□□□□ -1.71
YSF3YNL138W-A MSM1P22438 575 aa4.35□□□□□ -1.71
YSF3YNL138W-A PEX1P24004 1043 aa4.35□□□□□ -1.71
YSF3YNL138W-A DAL3P32459 195 aa4.35□□□□□ -1.71
YSF3YNL138W-A OAR1P35731 278 aa4.35□□□□□ -1.71
YSF3YNL138W-A REV7P38927 245 aa4.35□□□□□ -1.71
YSF3YNL138W-A DAS1P47005 663 aa4.35□□□□□ -1.71
YSF3YNL138W-A RCR2Q03446 210 aaKnown RBP4.35□□□□□ -1.71
YSF3YNL138W-A YPS7Q06325 596 aa4.35□□□□□ -1.71
YSF3YNL138W-A SIR3P06701 978 aa4.34□□□□□ -1.71
YSF3YNL138W-A FRS1P15624 595 aaKnown RBP4.34□□□□□ -1.71
YSF3YNL138W-A OAF3P36023 863 aa4.34□□□□□ -1.71
YSF3YNL138W-A FAT1P38225 669 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms