RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C TMA10Q06177 86 aa1□□□□□ -2.25
RKR1YMR247C NEW1Q08972 1196 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C HOS1Q12214 470 aa1□□□□□ -2.25
RKR1YMR247C KRS1P15180 591 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C CAD1P24813 409 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C UGA4P32837 571 aa1□□□□□ -2.25
RKR1YMR247C PPG1P32838 368 aa1□□□□□ -2.25
RKR1YMR247C YBR053CP38235 358 aa1□□□□□ -2.25
RKR1YMR247C SDH8P38345 138 aa1□□□□□ -2.25
RKR1YMR247C YJL193WP39542 402 aa1□□□□□ -2.25
RKR1YMR247C VPS8P39702 1274 aa1□□□□□ -2.25
RKR1YMR247C NOC2P39744 710 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C TAF4P50105 388 aa1□□□□□ -2.25
RKR1YMR247C SPC98P53540 846 aa1□□□□□ -2.25
RKR1YMR247C GRS2Q06817 618 aa1□□□□□ -2.25
RKR1YMR247C MSL5Q12186 476 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
RKR1YMR247C ZPS1Q12512 249 aa1□□□□□ -2.25
RKR1YMR247C PHR1P05066 565 aaKnown RBP RIP-Chip data1□□□□□ -2.25not detected
RKR1YMR247C TPK2P06245 380 aa1□□□□□ -2.25
RKR1YMR247C ADE5,7P07244 802 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C PCK1P10963 549 aa1□□□□□ -2.25
RKR1YMR247C PMA2P19657 947 aa1□□□□□ -2.25
RKR1YMR247C RNR1P21524 888 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C SAT4P25333 603 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C PWP2P25635 923 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C PCL2P25693 308 aa1□□□□□ -2.25
RKR1YMR247C GSY2P27472 705 aa1□□□□□ -2.25
RKR1YMR247C BCD1P38772 366 aa1□□□□□ -2.25
RKR1YMR247C UIP3P39547 235 aa1□□□□□ -2.25
RKR1YMR247C STL1P39932 569 aa1□□□□□ -2.25
RKR1YMR247C MRX1P40050 688 aa1□□□□□ -2.25
RKR1YMR247C UBP7P40453 1071 aa1□□□□□ -2.25
RKR1YMR247C RSC8P43609 557 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C TY4A-JP47023 414 aa1□□□□□ -2.25
RKR1YMR247C YGR153WP48238 217 aa1□□□□□ -2.25
RKR1YMR247C MUP1P50276 574 aa1□□□□□ -2.25
RKR1YMR247C YGL082WP53155 381 aa1□□□□□ -2.25
RKR1YMR247C SDA1P53313 767 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C SQS1P53866 767 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ERG13P54839 491 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C YPL108WQ02872 168 aaPredicted RBP1□□□□□ -2.25
RKR1YMR247C MRD1Q06106 887 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ATG33Q06485 197 aa1□□□□□ -2.25
RKR1YMR247C SKI3P17883 1432 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C RPS17AP02407 136 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C MIS1P09440 975 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C HEM1P09950 548 aaPredicted RBP1□□□□□ -2.25
RKR1YMR247C RPS17BP14127 136 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C FRS1P15624 595 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C RNQ1P25367 405 aa1□□□□□ -2.25
RKR1YMR247C FUB1P25659 250 aa1□□□□□ -2.25
RKR1YMR247C MNN4P36044 1178 aa1□□□□□ -2.25
RKR1YMR247C DSS1P39112 969 aa1□□□□□ -2.25
RKR1YMR247C FUN12P39730 1002 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C HOS4P40480 1083 aa1□□□□□ -2.25
RKR1YMR247C SKP2P42843 763 aa1□□□□□ -2.25
RKR1YMR247C YJL132WP47014 750 aa1□□□□□ -2.25
RKR1YMR247C NIT2P47016 307 aa1□□□□□ -2.25
RKR1YMR247C BPL1P48445 690 aaPredicted RBP1□□□□□ -2.25
RKR1YMR247C ASE1P50275 885 aa1□□□□□ -2.25
RKR1YMR247C YGR127WP53275 312 aa1□□□□□ -2.25
RKR1YMR247C IDP3P53982 420 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C TIM50Q02776 476 aa1□□□□□ -2.25
RKR1YMR247C ARO10Q06408 635 aa1□□□□□ -2.25
RKR1YMR247C MLC2Q06580 163 aa1□□□□□ -2.25
RKR1YMR247C CTI6Q08923 506 aa1□□□□□ -2.25
RKR1YMR247C CHS5Q12114 671 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C RDL1Q12305 139 aaKnown RBP1□□□□□ -2.25
RKR1YMR247C ARP7Q12406 477 aa1□□□□□ -2.25
RKR1YMR247C ARO1P08566 1588 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C BI2P03873 423 aa0.99□□□□□ -2.25
RKR1YMR247C HNM1P19807 563 aa0.99□□□□□ -2.25
RKR1YMR247C SUI2P20459 304 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C CRM1P30822 1084 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C ENP1P38333 483 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C SAK1P38990 1142 aa0.99□□□□□ -2.25
RKR1YMR247C UBP12P39538 1254 aa0.99□□□□□ -2.25
RKR1YMR247C KAP123P40069 1113 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C LRO1P40345 661 aa0.99□□□□□ -2.25
RKR1YMR247C ATF1P40353 525 aa0.99□□□□□ -2.25
RKR1YMR247C ULP2P40537 1034 aaPredicted RBP0.99□□□□□ -2.25
RKR1YMR247C MNT3P40549 630 aa0.99□□□□□ -2.25
RKR1YMR247C PSA1P41940 361 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C UBP8P50102 471 aa0.99□□□□□ -2.25
RKR1YMR247C TEX1P53851 422 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C NOP15P53927 220 aaPredicted RBP0.99□□□□□ -2.25
RKR1YMR247C KIN4Q01919 800 aa0.99□□□□□ -2.25
RKR1YMR247C HEL2Q05580 639 aaKnown RBP0.99□□□□□ -2.25
RKR1YMR247C THI22Q06490 572 aa0.99□□□□□ -2.25
RKR1YMR247C BSP1Q06604 576 aa0.99□□□□□ -2.25
RKR1YMR247C IZH3Q07959 543 aa0.99□□□□□ -2.25
RKR1YMR247C NTG2Q08214 380 aa0.99□□□□□ -2.25
RKR1YMR247C GPR1Q12361 961 aa0.99□□□□□ -2.25
RKR1YMR247C ARP6Q12509 438 aa0.99□□□□□ -2.25
RKR1YMR247C TOP1P04786 769 aa0.99□□□□□ -2.25
RKR1YMR247C KAR1P11927 433 aa0.99□□□□□ -2.25
RKR1YMR247C SFL1P20134 766 aa0.99□□□□□ -2.25
RKR1YMR247C SPE2P21182 396 aa0.99□□□□□ -2.25
RKR1YMR247C ADH7P25377 361 aa0.99□□□□□ -2.25
RKR1YMR247C CMK1P27466 446 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms