RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	MPD2	Q99316	277 aa		4.12	□□□□□ -1.75
CST9	YLR394W	TUP1	P16649	713 aa		4.11	□□□□□ -1.75
CST9	YLR394W	HCA4	P20448	770 aa	Known RBP	4.11	□□□□□ -1.75
CST9	YLR394W	ILV6	P25605	309 aa	Known RBP	4.11	□□□□□ -1.75
CST9	YLR394W	DGR2	P32330	852 aa		4.11	□□□□□ -1.75
CST9	YLR394W	RMA1	P36001	430 aa	Known RBP	4.11	□□□□□ -1.75
CST9	YLR394W	YHR097C	P38809	366 aa	Known RBP	4.11	□□□□□ -1.75
CST9	YLR394W	MPS3	P47069	682 aa		4.11	□□□□□ -1.75
CST9	YLR394W	TAH11	P47112	604 aa		4.11	□□□□□ -1.75
CST9	YLR394W	YDL183C	P48569	320 aa		4.11	□□□□□ -1.75
CST9	YLR394W	SLD3	P53135	668 aa		4.11	□□□□□ -1.75
CST9	YLR394W	VPS73	P53142	486 aa	Known RBP	4.11	□□□□□ -1.75
CST9	YLR394W	NSE5	Q03718	556 aa		4.11	□□□□□ -1.75
CST9	YLR394W	YOR378W	Q08902	515 aa		4.11	□□□□□ -1.75
CST9	YLR394W	CWC2	Q12046	339 aa	Predicted RBP	4.11	□□□□□ -1.75
CST9	YLR394W	YEL076C-A	P0CX16	216 aa		4.1	□□□□□ -1.75
CST9	YLR394W	YLR464W	P0CX17	216 aa		4.1	□□□□□ -1.75
CST9	YLR394W	KIN82	P25341	720 aa		4.1	□□□□□ -1.75
CST9	YLR394W	YEL076C	P39971	216 aa		4.1	□□□□□ -1.75
CST9	YLR394W	FTR1	P40088	404 aa		4.1	□□□□□ -1.75
CST9	YLR394W	PIG2	P40187	538 aa		4.1	□□□□□ -1.75
CST9	YLR394W	PHM6	Q05637	104 aa		4.1	□□□□□ -1.75
CST9	YLR394W	YAP7	Q08182	245 aa		4.1	□□□□□ -1.75
CST9	YLR394W	SWR1	Q05471	1514 aa		4.09	□□□□□ -1.75
CST9	YLR394W	RPS9B	P05755	195 aa	Known RBP	4.09	□□□□□ -1.75
CST9	YLR394W	PRP28	P23394	588 aa		4.09	□□□□□ -1.75
CST9	YLR394W	SRP68	P38687	599 aa	Known RBP	4.09	□□□□□ -1.75
CST9	YLR394W	YHR033W	P38690	423 aa		4.09	□□□□□ -1.75
CST9	YLR394W	KHA1	P40309	873 aa		4.09	□□□□□ -1.75
CST9	YLR394W	CCT7	P42943	550 aa	Known RBP	4.09	□□□□□ -1.75
CST9	YLR394W	SPO1	P53541	631 aa		4.09	□□□□□ -1.75
CST9	YLR394W	SMX3	P54999	86 aa	Predicted RBP	4.09	□□□□□ -1.75
CST9	YLR394W	TIM50	Q02776	476 aa		4.09	□□□□□ -1.75
CST9	YLR394W	PEX15	Q08215	383 aa		4.09	□□□□□ -1.75
CST9	YLR394W	SLX4	Q12098	748 aa		4.09	□□□□□ -1.75
CST9	YLR394W	RTK1	Q12100	620 aa	Predicted RBP	4.09	□□□□□ -1.75
CST9	YLR394W	USV1	Q12132	391 aa		4.09	□□□□□ -1.75
CST9	YLR394W	KAR1	P11927	433 aa		4.08	□□□□□ -1.76
CST9	YLR394W	KIN3	P22209	435 aa		4.08	□□□□□ -1.76
CST9	YLR394W	FLO10	P36170	1169 aa		4.08	□□□□□ -1.76
CST9	YLR394W	GRX7	P38068	203 aa		4.08	□□□□□ -1.76
CST9	YLR394W	EHT1	P38295	451 aa		4.08	□□□□□ -1.76
CST9	YLR394W	TMN3	P40071	706 aa		4.08	□□□□□ -1.76
CST9	YLR394W	EMP65	P40085	556 aa		4.08	□□□□□ -1.76
CST9	YLR394W	NDC80	P40460	691 aa		4.08	□□□□□ -1.76
CST9	YLR394W	YAP1802	P53309	568 aa		4.08	□□□□□ -1.76
CST9	YLR394W	MTD1	Q02046	320 aa	Known RBP	4.08	□□□□□ -1.76
CST9	YLR394W	IZH3	Q07959	543 aa		4.08	□□□□□ -1.76
CST9	YLR394W	DIN7	Q12086	430 aa		4.08	□□□□□ -1.76
CST9	YLR394W	TMA7	Q3E764	64 aa	Known RBP	4.08	□□□□□ -1.76
CST9	YLR394W	HMG2	P12684	1045 aa		4.07	□□□□□ -1.76
CST9	YLR394W	CDC43	P18898	376 aa		4.07	□□□□□ -1.76
CST9	YLR394W	PRP22	P24384	1145 aa	Known RBP	4.07	□□□□□ -1.76
CST9	YLR394W	CTP1	P38152	299 aa		4.07	□□□□□ -1.76
CST9	YLR394W	CBR1	P38626	284 aa	Known RBP	4.07	□□□□□ -1.76
CST9	YLR394W	PEA2	P40091	420 aa		4.07	□□□□□ -1.76
CST9	YLR394W	MAD2	P40958	196 aa		4.07	□□□□□ -1.76
CST9	YLR394W	ATG36	P46983	293 aa		4.07	□□□□□ -1.76
CST9	YLR394W	SNF12	P53628	566 aa		4.07	□□□□□ -1.76
CST9	YLR394W	SSL2	Q00578	843 aa		4.07	□□□□□ -1.76
CST9	YLR394W	PPN1	Q04119	674 aa		4.07	□□□□□ -1.76
CST9	YLR394W	YOL057W	Q08225	711 aa		4.07	□□□□□ -1.76
CST9	YLR394W	SST2	P11972	698 aa	Known RBP	4.06	□□□□□ -1.76
CST9	YLR394W	TMT1	P32643	299 aa		4.06	□□□□□ -1.76
CST9	YLR394W	YIL092W	P40497	633 aa		4.06	□□□□□ -1.76
CST9	YLR394W	YJR008W	P47085	338 aa		4.06	□□□□□ -1.76
CST9	YLR394W	PEF1	P53238	335 aa		4.06	□□□□□ -1.76
CST9	YLR394W	YGR151C	P53287	111 aa		4.06	□□□□□ -1.76
CST9	YLR394W	ATG4	P53867	494 aa		4.06	□□□□□ -1.76
CST9	YLR394W	CEG1	Q01159	459 aa	Predicted RBP	4.06	□□□□□ -1.76
CST9	YLR394W	FDC1	Q03034	503 aa		4.06	□□□□□ -1.76
CST9	YLR394W	YCG1	Q06680	1035 aa		4.06	□□□□□ -1.76
CST9	YLR394W	YDL086W	Q07505	273 aa		4.06	□□□□□ -1.76
CST9	YLR394W	FUB1	P25659	250 aa		4.05	□□□□□ -1.76
CST9	YLR394W	ENP2	P48234	707 aa	Known RBP	4.05	□□□□□ -1.76
CST9	YLR394W	MNT2	P53059	558 aa		4.05	□□□□□ -1.76
CST9	YLR394W	NMA2	P53204	395 aa		4.05	□□□□□ -1.76
CST9	YLR394W	HLR1	Q04429	423 aa		4.05	□□□□□ -1.76
CST9	YLR394W	ARO10	Q06408	635 aa		4.05	□□□□□ -1.76
CST9	YLR394W	CLF1	Q12309	687 aa	Predicted RBP	4.05	□□□□□ -1.76
CST9	YLR394W	SEC15	P22224	910 aa		4.04	□□□□□ -1.76
CST9	YLR394W	ADY2	P25613	283 aa		4.04	□□□□□ -1.76
CST9	YLR394W	KSP1	P38691	1029 aa	Known RBP	4.04	□□□□□ -1.76
CST9	YLR394W	STL1	P39932	569 aa		4.04	□□□□□ -1.76
CST9	YLR394W	YIL166C	P40445	542 aa		4.04	□□□□□ -1.76
CST9	YLR394W	ARR3	Q06598	404 aa		4.04	□□□□□ -1.76
CST9	YLR394W	TAF3	Q12297	353 aa		4.04	□□□□□ -1.76
CST9	YLR394W	GAL1	P04385	528 aa		4.04	□□□□□ -1.76
CST9	YLR394W	ARG1	P22768	420 aa		4.04	□□□□□ -1.76
CST9	YLR394W	KCC4	P25389	1037 aa		4.04	□□□□□ -1.76
CST9	YLR394W	ELF1	P36053	145 aa		4.04	□□□□□ -1.76
CST9	YLR394W	MRPL7	P36519	292 aa		4.04	□□□□□ -1.76
CST9	YLR394W	RRP8	P38961	392 aa	Known RBP	4.04	□□□□□ -1.76
CST9	YLR394W	PUS4	P48567	403 aa	Known RBP	4.04	□□□□□ -1.76
CST9	YLR394W	YGR054W	P53235	642 aa	Known RBP	4.04	□□□□□ -1.76
CST9	YLR394W	CNM67	P53865	581 aa	Known RBP	4.04	□□□□□ -1.76
CST9	YLR394W	MET14	Q02196	202 aa		4.04	□□□□□ -1.76
CST9	YLR394W	THI7	Q05998	598 aa		4.04	□□□□□ -1.76
CST9	YLR394W	KOG1	P38873	1557 aa		4.03	□□□□□ -1.76
CST9	YLR394W	URA3	P03962	267 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms