RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	BMS1	Q08965	1183 aa	Known RBP	5.23	□□□□□ -1.57
EBP2	YKL172W	SLX4	Q12098	748 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	VPS5	Q92331	675 aa		5.23	□□□□□ -1.57
EBP2	YKL172W	FUB1	P25659	250 aa		5.22	□□□□□ -1.57
EBP2	YKL172W	IRC5	P43610	853 aa		5.22	□□□□□ -1.57
EBP2	YKL172W	YGR151C	P53287	111 aa		5.22	□□□□□ -1.57
EBP2	YKL172W	SQS1	P53866	767 aa	Known RBP	5.22	□□□□□ -1.57
EBP2	YKL172W	MTD1	Q02046	320 aa	Known RBP	5.22	□□□□□ -1.57
EBP2	YKL172W	CEF1	Q03654	590 aa	Predicted RBP	5.22	□□□□□ -1.57
EBP2	YKL172W	YEL076C-A	P0CX16	216 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	YLR464W	P0CX17	216 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	KIN3	P22209	435 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	APL3	P38065	1025 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	YJL206C	P39529	758 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	SSP120	P39931	234 aa	Known RBP	5.21	□□□□□ -1.58
EBP2	YKL172W	YEL076C	P39971	216 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	FTR1	P40088	404 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	PEF1	P53238	335 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	PEX8	P53248	589 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	GND2	P53319	492 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	YCG1	Q06680	1035 aa		5.21	□□□□□ -1.58
EBP2	YKL172W	CWC2	Q12046	339 aa	Predicted RBP	5.21	□□□□□ -1.58
EBP2	YKL172W	HMG2	P12684	1045 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	MSS1	P32559	526 aa	Predicted RBP	5.2	□□□□□ -1.58
EBP2	YKL172W	MTH1	P35198	433 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	SET3	P36124	751 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	GMH1	P36125	273 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	CRG1	P38892	291 aa	RIP-Chip data	5.2	□□□□□ -1.58	not detected
EBP2	YKL172W	ECM38	Q05902	660 aa	Predicted RBP	5.2	□□□□□ -1.58
EBP2	YKL172W	IZH3	Q07959	543 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	IRC10	Q08118	586 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	PSF3	Q12146	194 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	TAF3	Q12297	353 aa		5.2	□□□□□ -1.58
EBP2	YKL172W	GFA1	P14742	717 aa	Known RBP	5.19	□□□□□ -1.58
EBP2	YKL172W	KCC4	P25389	1037 aa		5.19	□□□□□ -1.58
EBP2	YKL172W	MTC7	P32633	139 aa		5.19	□□□□□ -1.58
EBP2	YKL172W	DHR2	P36009	735 aa	Predicted RBP	5.19	□□□□□ -1.58
EBP2	YKL172W	STL1	P39932	569 aa		5.19	□□□□□ -1.58
EBP2	YKL172W	NOP2	P40991	618 aa	Known RBP	5.19	□□□□□ -1.58
EBP2	YKL172W	SND1	Q04007	877 aa		5.19	□□□□□ -1.58
EBP2	YKL172W	MRH1	Q12117	320 aa	Predicted RBP	5.19	□□□□□ -1.58
EBP2	YKL172W	TUP1	P16649	713 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	CWH43	P25618	953 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	CDS1	P38221	457 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	KSP1	P38691	1029 aa	Known RBP	5.18	□□□□□ -1.58
EBP2	YKL172W	YEL025C	P39991	1188 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	TMN3	P40071	706 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	DAK1	P54838	584 aa	Known RBP	5.18	□□□□□ -1.58
EBP2	YKL172W	UFO1	Q04511	668 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	RKI1	Q12189	258 aa		5.18	□□□□□ -1.58
EBP2	YKL172W	NIC96	P34077	839 aa		5.17	□□□□□ -1.58
EBP2	YKL172W	TAF5	P38129	798 aa		5.17	□□□□□ -1.58
EBP2	YKL172W	THI6	P41835	540 aa		5.17	□□□□□ -1.58
EBP2	YKL172W	CCT7	P42943	550 aa	Known RBP	5.17	□□□□□ -1.58
EBP2	YKL172W	QRI1	P43123	477 aa	Known RBP	5.17	□□□□□ -1.58
EBP2	YKL172W	CNM67	P53865	581 aa	Known RBP	5.17	□□□□□ -1.58
EBP2	YKL172W	YNL034W	P53963	612 aa		5.17	□□□□□ -1.58
EBP2	YKL172W	YNL018C	P53976	612 aa		5.17	□□□□□ -1.58
EBP2	YKL172W	YOR378W	Q08902	515 aa		5.17	□□□□□ -1.58
EBP2	YKL172W	SEC12	P11655	471 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	PHO3	P24031	467 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	SDS22	P36047	338 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	YHR097C	P38809	366 aa	Known RBP	5.16	□□□□□ -1.58
EBP2	YKL172W	SAW1	P39735	261 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	EAF5	P39995	279 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	YGR054W	P53235	642 aa	Known RBP	5.16	□□□□□ -1.58
EBP2	YKL172W	MDR1	P53258	950 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	DIP5	P53388	608 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	IOC4	Q04213	475 aa		5.16	□□□□□ -1.58
EBP2	YKL172W	RPN13	O13563	156 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	ATP4	P05626	244 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	ELF1	P36053	145 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	UBS1	P38290	277 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	PPE1	P38796	400 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	PMT6	P42934	759 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	TAH11	P47112	604 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	YDL183C	P48569	320 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	MNT2	P53059	558 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	TAN1	P53072	289 aa	Predicted RBP	5.15	□□□□□ -1.59
EBP2	YKL172W	VPS73	P53142	486 aa	Known RBP	5.15	□□□□□ -1.59
EBP2	YKL172W	NMA2	P53204	395 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	SPC98	P53540	846 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	TGL2	P54857	326 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	TIM50	Q02776	476 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	NGL2	Q03264	515 aa	Known RBP	5.15	□□□□□ -1.59
EBP2	YKL172W	HOS1	Q12214	470 aa		5.15	□□□□□ -1.59
EBP2	YKL172W	CAP1	P28495	268 aa	Known RBP	5.14	□□□□□ -1.59
EBP2	YKL172W	PET309	P32522	965 aa	Predicted RBP	5.14	□□□□□ -1.59
EBP2	YKL172W	RMA1	P36001	430 aa	Known RBP	5.14	□□□□□ -1.59
EBP2	YKL172W	YJL193W	P39542	402 aa		5.14	□□□□□ -1.59
EBP2	YKL172W	LRO1	P40345	661 aa		5.14	□□□□□ -1.59
EBP2	YKL172W	YIL092W	P40497	633 aa		5.14	□□□□□ -1.59
EBP2	YKL172W	SNF12	P53628	566 aa		5.14	□□□□□ -1.59
EBP2	YKL172W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
EBP2	YKL172W	HOP1	P20050	605 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	VPS33	P20795	691 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	YKL133C	P36066	463 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	MRPL7	P36519	292 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	EHT1	P38295	451 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	TDP1	P38319	544 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms