RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W CTS1P29029 562 aa6.19□□□□□ -1.42
SPO12YHR152W HRR25P29295 494 aaKnown RBP6.19□□□□□ -1.42
SPO12YHR152W MRS6P32864 603 aaKnown RBP6.19□□□□□ -1.42
SPO12YHR152W SWE1P32944 819 aa6.19□□□□□ -1.42
SPO12YHR152W COS111P38308 924 aa6.19□□□□□ -1.42
SPO12YHR152W CRG1P38892 291 aaRIP-Chip data6.19□□□□□ -1.42not detected
SPO12YHR152W SWD1P39706 426 aa6.19□□□□□ -1.42
SPO12YHR152W YIL077CP40508 320 aa6.19□□□□□ -1.42
SPO12YHR152W YNR071CP53757 342 aa6.19□□□□□ -1.42
SPO12YHR152W ADY4Q05955 493 aa6.19□□□□□ -1.42
SPO12YHR152W HIM1Q06674 414 aa6.19□□□□□ -1.42
SPO12YHR152W YFT2Q06676 274 aa6.19□□□□□ -1.42
SPO12YHR152W AIM39Q08223 395 aa6.19□□□□□ -1.42
SPO12YHR152W NTO1Q12311 748 aa6.19□□□□□ -1.42
SPO12YHR152W DBP10Q12389 995 aaKnown RBP6.19□□□□□ -1.42
SPO12YHR152W CBP3P21560 335 aa6.18□□□□□ -1.42
SPO12YHR152W PRP28P23394 588 aa6.18□□□□□ -1.42
SPO12YHR152W MSH1P25846 959 aa6.18□□□□□ -1.42
SPO12YHR152W DBF20P32328 564 aa6.18□□□□□ -1.42
SPO12YHR152W DEF1P35732 738 aaKnown RBP6.18□□□□□ -1.42
SPO12YHR152W YKL222CP35995 705 aa6.18□□□□□ -1.42
SPO12YHR152W TAF5P38129 798 aa6.18□□□□□ -1.42
SPO12YHR152W FTR1P40088 404 aa6.18□□□□□ -1.42
SPO12YHR152W PIG2P40187 538 aa6.18□□□□□ -1.42
SPO12YHR152W IMA5P40884 581 aa6.18□□□□□ -1.42
SPO12YHR152W YJL163CP46996 555 aa6.18□□□□□ -1.42
SPO12YHR152W MAD3P47074 515 aa6.18□□□□□ -1.42
SPO12YHR152W YDL183CP48569 320 aa6.18□□□□□ -1.42
SPO12YHR152W MOT3P54785 490 aaKnown RBP6.18□□□□□ -1.42
SPO12YHR152W TRI1Q05024 226 aa6.18□□□□□ -1.42
SPO12YHR152W YCG1Q06680 1035 aa6.18□□□□□ -1.42
SPO12YHR152W PSR2Q07949 397 aa6.18□□□□□ -1.42
SPO12YHR152W BUD21Q08492 214 aaPredicted RBP6.18□□□□□ -1.42
SPO12YHR152W URA3P03962 267 aa6.17□□□□□ -1.42
SPO12YHR152W SIR3P06701 978 aa6.17□□□□□ -1.42
SPO12YHR152W SEC18P18759 758 aaKnown RBP6.17□□□□□ -1.42
SPO12YHR152W SHM2P37291 469 aaKnown RBP6.17□□□□□ -1.42
SPO12YHR152W HRB1P38922 454 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SPO12YHR152W REV7P38927 245 aa6.17□□□□□ -1.42
SPO12YHR152W UBP5P39944 805 aa6.17□□□□□ -1.42
SPO12YHR152W RPT2P40327 437 aaKnown RBP6.17□□□□□ -1.42
SPO12YHR152W VPS27P40343 622 aaKnown RBP6.17□□□□□ -1.42
SPO12YHR152W TAH11P47112 604 aa6.17□□□□□ -1.42
SPO12YHR152W RFX1P48743 811 aa6.17□□□□□ -1.42
SPO12YHR152W FDC1Q03034 503 aa6.17□□□□□ -1.42
SPO12YHR152W AIM41Q12032 185 aa6.17□□□□□ -1.42
SPO12YHR152W CLF1Q12309 687 aaPredicted RBP6.17□□□□□ -1.42
SPO12YHR152W ZRT2Q12436 422 aa6.17□□□□□ -1.42
SPO12YHR152W ALG7P07286 448 aa6.16□□□□□ -1.42
SPO12YHR152W TUP1P16649 713 aa6.16□□□□□ -1.42
SPO12YHR152W HIS7P33734 552 aaKnown RBP6.16□□□□□ -1.42
SPO12YHR152W YLF2P38746 405 aa6.16□□□□□ -1.42
SPO12YHR152W SFB3P38810 929 aa6.16□□□□□ -1.42
SPO12YHR152W FMP52P40008 231 aa6.16□□□□□ -1.42
SPO12YHR152W PAN2P53010 1115 aaPredicted RBP6.16□□□□□ -1.42
SPO12YHR152W RNT1Q02555 471 aa6.16□□□□□ -1.42
SPO12YHR152W YLR040CQ07988 224 aa6.16□□□□□ -1.42
SPO12YHR152W CHS5Q12114 671 aaKnown RBP6.16□□□□□ -1.42
SPO12YHR152W HOS1Q12214 470 aa6.16□□□□□ -1.42
SPO12YHR152W YKL033W-AQ86ZR7 236 aa6.16□□□□□ -1.42
SPO12YHR152W MSM1P22438 575 aa6.15□□□□□ -1.42
SPO12YHR152W ARG1P22768 420 aa6.15□□□□□ -1.42
SPO12YHR152W APM3P38153 483 aa6.15□□□□□ -1.42
SPO12YHR152W SAP185P40856 1058 aa6.15□□□□□ -1.42
SPO12YHR152W CIA1Q05583 330 aa6.15□□□□□ -1.42
SPO12YHR152W MCH5Q08777 521 aa6.15□□□□□ -1.42
SPO12YHR152W TUF1P02992 437 aaKnown RBP6.14□□□□□ -1.43
SPO12YHR152W SPC72P39723 622 aa6.14□□□□□ -1.43
SPO12YHR152W MDR1P53258 950 aa6.14□□□□□ -1.43
SPO12YHR152W NRD1P53617 575 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
SPO12YHR152W PPR1P07272 904 aaPredicted RBP6.13□□□□□ -1.43
SPO12YHR152W YCR015CP25616 317 aa6.13□□□□□ -1.43
SPO12YHR152W MSS1P32559 526 aaPredicted RBP6.13□□□□□ -1.43
SPO12YHR152W PHO11P35842 467 aa6.13□□□□□ -1.43
SPO12YHR152W EHT1P38295 451 aa6.13□□□□□ -1.43
SPO12YHR152W PHO12P38693 467 aa6.13□□□□□ -1.43
SPO12YHR152W TMN3P40071 706 aa6.13□□□□□ -1.43
SPO12YHR152W FHN1P53279 174 aa6.13□□□□□ -1.43
SPO12YHR152W TIM50Q02776 476 aa6.13□□□□□ -1.43
SPO12YHR152W EIS1Q05050 843 aaKnown RBP6.13□□□□□ -1.43
SPO12YHR152W PMI40P29952 429 aaKnown RBP6.12□□□□□ -1.43
SPO12YHR152W EXO84P38261 753 aa6.12□□□□□ -1.43
SPO12YHR152W SUL1P38359 859 aa6.12□□□□□ -1.43
SPO12YHR152W STT3P39007 718 aaKnown RBP6.12□□□□□ -1.43
SPO12YHR152W MPS3P47069 682 aa6.12□□□□□ -1.43
SPO12YHR152W UBA2P52488 636 aa6.12□□□□□ -1.43
SPO12YHR152W TEL2P53038 688 aa6.12□□□□□ -1.43
SPO12YHR152W YAP1802P53309 568 aa6.12□□□□□ -1.43
SPO12YHR152W ESC8Q08119 714 aa6.12□□□□□ -1.43
SPO12YHR152W MLH3Q12083 715 aa6.12□□□□□ -1.43
SPO12YHR152W NTH1P32356 751 aa6.11□□□□□ -1.43
SPO12YHR152W KHA1P40309 873 aa6.11□□□□□ -1.43
SPO12YHR152W ERR3P42222 437 aa6.11□□□□□ -1.43
SPO12YHR152W GSM1P42950 618 aa6.11□□□□□ -1.43
SPO12YHR152W CPR6P53691 371 aaKnown RBP6.11□□□□□ -1.43
SPO12YHR152W ARR3Q06598 404 aa6.11□□□□□ -1.43
SPO12YHR152W YDL121CQ07541 149 aa6.11□□□□□ -1.43
SPO12YHR152W AAD4Q07747 329 aa6.11□□□□□ -1.43
SPO12YHR152W THR1P17423 357 aaKnown RBP6.1□□□□□ -1.43
SPO12YHR152W MCM3P24279 971 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 81 ms