RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C MUP3P38734 546 aa4.92□□□□□ -1.62
CUP1-2YHR055C YEL020CP39994 560 aa4.92□□□□□ -1.62
CUP1-2YHR055C TMN3P40071 706 aa4.92□□□□□ -1.62
CUP1-2YHR055C PMT6P42934 759 aa4.92□□□□□ -1.62
CUP1-2YHR055C GIS1Q03833 894 aa4.92□□□□□ -1.62
CUP1-2YHR055C HLR1Q04429 423 aa4.92□□□□□ -1.62
CUP1-2YHR055C AIM41Q12032 185 aa4.92□□□□□ -1.62
CUP1-2YHR055C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
CUP1-2YHR055C CDC26P14724 124 aa4.91□□□□□ -1.62
CUP1-2YHR055C ADY2P25613 283 aa4.91□□□□□ -1.62
CUP1-2YHR055C MF(ALPHA)2P32435 120 aa4.91□□□□□ -1.62
CUP1-2YHR055C DAL3P32459 195 aa4.91□□□□□ -1.62
CUP1-2YHR055C GPP2P40106 250 aaKnown RBP4.91□□□□□ -1.62
CUP1-2YHR055C PRM2P40534 656 aa4.91□□□□□ -1.62
CUP1-2YHR055C THI6P41835 540 aa4.91□□□□□ -1.62
CUP1-2YHR055C DAK1P54838 584 aaKnown RBP4.91□□□□□ -1.62
CUP1-2YHR055C NGL2Q03264 515 aaKnown RBP4.91□□□□□ -1.62
CUP1-2YHR055C CEF1Q03654 590 aaPredicted RBP4.91□□□□□ -1.62
CUP1-2YHR055C MDM20Q12387 796 aaKnown RBP4.91□□□□□ -1.62
CUP1-2YHR055C TUB1P09733 447 aaKnown RBP4.9□□□□□ -1.63
CUP1-2YHR055C EMP70P32802 667 aa4.9□□□□□ -1.63
CUP1-2YHR055C CUE2P36075 443 aaKnown RBP4.9□□□□□ -1.63
CUP1-2YHR055C PPE1P38796 400 aa4.9□□□□□ -1.63
CUP1-2YHR055C CRG1P38892 291 aaRIP-Chip data4.9□□□□□ -1.63not detected
CUP1-2YHR055C FTR1P40088 404 aa4.9□□□□□ -1.63
CUP1-2YHR055C ATF1P40353 525 aa4.9□□□□□ -1.63
CUP1-2YHR055C SPC105P53148 917 aa4.9□□□□□ -1.63
CUP1-2YHR055C TMA17Q12513 150 aa4.9□□□□□ -1.63
CUP1-2YHR055C TUP1P16649 713 aa4.89□□□□□ -1.63
CUP1-2YHR055C RPA135P22138 1203 aaKnown RBP4.89□□□□□ -1.63
CUP1-2YHR055C RIX1P38883 763 aaPredicted RBP4.89□□□□□ -1.63
CUP1-2YHR055C YEL025CP39991 1188 aa4.89□□□□□ -1.63
CUP1-2YHR055C PEA2P40091 420 aa4.89□□□□□ -1.63
CUP1-2YHR055C NIT2P47016 307 aa4.89□□□□□ -1.63
CUP1-2YHR055C SQS1P53866 767 aaKnown RBP4.89□□□□□ -1.63
CUP1-2YHR055C NGL1Q08213 363 aaKnown RBP4.89□□□□□ -1.63
CUP1-2YHR055C STE12P13574 688 aa4.88□□□□□ -1.63
CUP1-2YHR055C HXT4P32467 576 aa4.88□□□□□ -1.63
CUP1-2YHR055C SER1P33330 395 aaKnown RBP4.88□□□□□ -1.63
CUP1-2YHR055C DHR2P36009 735 aaPredicted RBP4.88□□□□□ -1.63
CUP1-2YHR055C YMC2P38087 329 aa4.88□□□□□ -1.63
CUP1-2YHR055C YBR071WP38243 211 aa4.88□□□□□ -1.63
CUP1-2YHR055C SRP68P38687 599 aaKnown RBP4.88□□□□□ -1.63
CUP1-2YHR055C MRK1P50873 501 aa4.88□□□□□ -1.63
CUP1-2YHR055C SLD3P53135 668 aa4.88□□□□□ -1.63
CUP1-2YHR055C SNF12P53628 566 aa4.88□□□□□ -1.63
CUP1-2YHR055C TIM50Q02776 476 aa4.88□□□□□ -1.63
CUP1-2YHR055C YDR179W-AQ03983 463 aa4.88□□□□□ -1.63
CUP1-2YHR055C ARO10Q06408 635 aa4.88□□□□□ -1.63
CUP1-2YHR055C YCG1Q06680 1035 aa4.88□□□□□ -1.63
CUP1-2YHR055C BNR1P40450 1375 aa4.88□□□□□ -1.63
CUP1-2YHR055C TUF1P02992 437 aaKnown RBP4.87□□□□□ -1.63
CUP1-2YHR055C HMG2P12684 1045 aa4.87□□□□□ -1.63
CUP1-2YHR055C PEX2P32800 271 aa4.87□□□□□ -1.63
CUP1-2YHR055C CDS1P38221 457 aa4.87□□□□□ -1.63
CUP1-2YHR055C EMP65P40085 556 aa4.87□□□□□ -1.63
CUP1-2YHR055C YGR054WP53235 642 aaKnown RBP4.87□□□□□ -1.63
CUP1-2YHR055C MFM1Q02783 413 aa4.87□□□□□ -1.63
CUP1-2YHR055C PHO5P00635 467 aa4.86□□□□□ -1.63
CUP1-2YHR055C TPK2P06245 380 aa4.86□□□□□ -1.63
CUP1-2YHR055C KAR1P11927 433 aa4.86□□□□□ -1.63
CUP1-2YHR055C COX11P19516 300 aaKnown RBP4.86□□□□□ -1.63
CUP1-2YHR055C ATP12P22135 325 aa4.86□□□□□ -1.63
CUP1-2YHR055C PIH1P38768 344 aa4.86□□□□□ -1.63
CUP1-2YHR055C PMC1P38929 1173 aaPredicted RBP4.86□□□□□ -1.63
CUP1-2YHR055C PAC2P39937 518 aa4.86□□□□□ -1.63
CUP1-2YHR055C MIT1P40002 666 aa4.86□□□□□ -1.63
CUP1-2YHR055C LGE1Q02796 332 aaKnown RBP4.86□□□□□ -1.63
CUP1-2YHR055C TRS23Q03784 219 aa4.86□□□□□ -1.63
CUP1-2YHR055C SLK19Q08581 821 aaKnown RBP4.86□□□□□ -1.63
CUP1-2YHR055C NDJ1Q12366 352 aa4.86□□□□□ -1.63
CUP1-2YHR055C SSB1P11484 613 aaKnown RBP4.85□□□□□ -1.63
CUP1-2YHR055C SAT4P25333 603 aaKnown RBP4.85□□□□□ -1.63
CUP1-2YHR055C MRC1P25588 1096 aa4.85□□□□□ -1.63
CUP1-2YHR055C MTC7P32633 139 aa4.85□□□□□ -1.63
CUP1-2YHR055C MRPL7P36519 292 aa4.85□□□□□ -1.63
CUP1-2YHR055C PAF1P38351 445 aa4.85□□□□□ -1.63
CUP1-2YHR055C RIM4P38741 713 aa4.85□□□□□ -1.63
CUP1-2YHR055C SSB2P40150 613 aaKnown RBP4.85□□□□□ -1.63
CUP1-2YHR055C ATG36P46983 293 aa4.85□□□□□ -1.63
CUP1-2YHR055C YJR120WP47157 116 aa4.85□□□□□ -1.63
CUP1-2YHR055C ASN1P49089 572 aaKnown RBP4.85□□□□□ -1.63
CUP1-2YHR055C HOL1P53389 586 aa4.85□□□□□ -1.63
CUP1-2YHR055C EFR3Q03653 782 aaKnown RBP4.85□□□□□ -1.63
CUP1-2YHR055C YPL216WQ08964 1102 aa4.85□□□□□ -1.63
CUP1-2YHR055C YEL076C-AP0CX16 216 aa4.84□□□□□ -1.63
CUP1-2YHR055C YLR464WP0CX17 216 aa4.84□□□□□ -1.63
CUP1-2YHR055C STE4P18851 423 aa4.84□□□□□ -1.63
CUP1-2YHR055C UGP1P32861 499 aaKnown RBP4.84□□□□□ -1.63
CUP1-2YHR055C EHT1P38295 451 aa4.84□□□□□ -1.63
CUP1-2YHR055C YEL076CP39971 216 aa4.84□□□□□ -1.63
CUP1-2YHR055C YIP4P53093 235 aa4.84□□□□□ -1.63
CUP1-2YHR055C IMO32P53219 342 aa4.84□□□□□ -1.63
CUP1-2YHR055C MDR1P53258 950 aa4.84□□□□□ -1.63
CUP1-2YHR055C COG6P53959 839 aa4.84□□□□□ -1.63
CUP1-2YHR055C ADE5,7P07244 802 aaKnown RBP4.83□□□□□ -1.64
CUP1-2YHR055C SEC12P11655 471 aa4.83□□□□□ -1.64
CUP1-2YHR055C CAP1P28495 268 aaKnown RBP4.83□□□□□ -1.64
CUP1-2YHR055C IRC5P43610 853 aa4.83□□□□□ -1.64
CUP1-2YHR055C PEX14P53112 341 aa4.83□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 69.2 ms