RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB2, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB2	YHR041C	STE11	P23561	717 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	13.77	□□□□□ -0.21	not detected
SRB2	YHR041C	YCR015C	P25616	317 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	GPI10	P30777	616 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	DAL1	P32375	460 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	YBR225W	P38321	900 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	END3	P39013	349 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	YPQ1	Q12010	308 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	RMP1	Q12530	201 aa		13.77	□□□□□ -0.21
SRB2	YHR041C	RAD16	P31244	790 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	SAF1	P38352	637 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	SPC72	P39723	622 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	KTR6	P54070	446 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	SXM1	Q04175	944 aa	Known RBP	13.76	□□□□□ -0.21
SRB2	YHR041C	ERV41	Q04651	352 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	ECI1	Q05871	280 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	KAP95	Q06142	861 aa	Known RBP	13.76	□□□□□ -0.21
SRB2	YHR041C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	13.76	□□□□□ -0.21	not detected
SRB2	YHR041C	THI20	Q08224	551 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	MNL2	Q12205	849 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	NDJ1	Q12366	352 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	VPS5	Q92331	675 aa		13.76	□□□□□ -0.21
SRB2	YHR041C	SFL1	P20134	766 aa		13.75	□□□□□ -0.21
SRB2	YHR041C	ISF1	P32488	338 aa		13.75	□□□□□ -0.21
SRB2	YHR041C	GCD6	P32501	712 aa	Known RBP	13.75	□□□□□ -0.21
SRB2	YHR041C	PMC1	P38929	1173 aa	Predicted RBP	13.75	□□□□□ -0.21
SRB2	YHR041C	YNL040W	P53960	456 aa	Predicted RBP	13.75	□□□□□ -0.21
SRB2	YHR041C	BSP1	Q06604	576 aa		13.75	□□□□□ -0.21
SRB2	YHR041C	SGO1	Q08490	590 aa		13.75	□□□□□ -0.21
SRB2	YHR041C	DPB3	P27344	201 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	HSP78	P33416	811 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	13.74	□□□□□ -0.21	not detected
SRB2	YHR041C	SFB3	P38810	929 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	MMF1	P40185	145 aa	Known RBP	13.74	□□□□□ -0.21
SRB2	YHR041C	VPS25	P47142	202 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	MTD1	Q02046	320 aa	Known RBP	13.74	□□□□□ -0.21
SRB2	YHR041C	PIR3	Q03180	325 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	YMR187C	Q03236	431 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	PIG1	Q06216	648 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	YOR387C	Q08910	206 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	AIM41	Q12032	185 aa		13.74	□□□□□ -0.21
SRB2	YHR041C	FLC2	P39719	783 aa		13.73	□□□□□ -0.21
SRB2	YHR041C	SAW1	P39735	261 aa		13.73	□□□□□ -0.21
SRB2	YHR041C	VTC4	P47075	721 aa		13.73	□□□□□ -0.21
SRB2	YHR041C	RSM26	P47141	266 aa		13.73	□□□□□ -0.21
SRB2	YHR041C	UTP8	P53276	713 aa	Known RBP	13.73	□□□□□ -0.21
SRB2	YHR041C	HOS3	Q02959	697 aa	Known RBP	13.73	□□□□□ -0.21
SRB2	YHR041C	ARA2	Q04212	335 aa		13.73	□□□□□ -0.21
SRB2	YHR041C	AIM32	Q04689	311 aa		13.73	□□□□□ -0.21
SRB2	YHR041C	PET111	P08468	800 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	MEI4	P29467	408 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	GCG1	P32656	232 aa	Known RBP	13.72	□□□□□ -0.21
SRB2	YHR041C	CDC27	P38042	758 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	LYS9	P38999	446 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	RRT5	P43607	289 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	NMD5	P46970	1048 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	ATG36	P46983	293 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	RKM2	Q03942	479 aa		13.72	□□□□□ -0.21
SRB2	YHR041C	HSF1	P10961	833 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	APE1	P14904	514 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	RGR1	P19263	1082 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	PRP9	P19736	530 aa	Known RBP	13.71	□□□□□ -0.21
SRB2	YHR041C	MMS21	P38632	267 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	ERP2	P39704	215 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	VTI1	Q04338	217 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	YDR018C	Q12185	396 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	ARP7	Q12406	477 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	ZRT2	Q12436	422 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	IZH4	Q99393	312 aa		13.71	□□□□□ -0.21
SRB2	YHR041C	CCP1	P00431	361 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	SYN8	P31377	255 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	TSA1	P34760	196 aa	Known RBP	13.7	□□□□□ -0.22
SRB2	YHR041C	PCA1	P38360	1216 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	MSG5	P38590	489 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	YHR131C	P38835	850 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	PEX28	P38848	579 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	CEP3	P40969	608 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	YNL320W	P42840	284 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	RPC17	P47076	161 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	NMA111	P53920	997 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	MTG1	Q03151	367 aa	Predicted RBP	13.7	□□□□□ -0.22
SRB2	YHR041C	THI7	Q05998	598 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	THI21	Q08975	551 aa		13.7	□□□□□ -0.22
SRB2	YHR041C	LPX1	Q12405	387 aa	Known RBP	13.7	□□□□□ -0.22
SRB2	YHR041C	TUB3	P09734	445 aa	Known RBP	13.69	□□□□□ -0.22
SRB2	YHR041C	MET16	P18408	261 aa	Predicted RBP	13.69	□□□□□ -0.22
SRB2	YHR041C	DUG2	P38149	878 aa		13.69	□□□□□ -0.22
SRB2	YHR041C	RGD1	P38339	666 aa		13.69	□□□□□ -0.22
SRB2	YHR041C	PRP31	P49704	494 aa	Predicted RBP	13.69	□□□□□ -0.22
SRB2	YHR041C	ACM1	Q08981	209 aa		13.69	□□□□□ -0.22
SRB2	YHR041C	YIH1	P25637	258 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	ARG2	P40360	574 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	SNG1	P46950	547 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	YML6	P51998	286 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	MAL13	P53338	473 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	TRM112	P53738	135 aa	Predicted RBP	13.68	□□□□□ -0.22
SRB2	YHR041C	VPS60	Q03390	229 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	ATG23	Q06671	453 aa		13.68	□□□□□ -0.22
SRB2	YHR041C	NOP14	Q99207	810 aa	Known RBP	13.68	□□□□□ -0.22
SRB2	YHR041C	YPK1	P12688	680 aa	Known RBP	13.67	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms