RNA–Protein interactions for RNA: YHL024W

RIM4, Transcript of Putative RNA-binding protein, yeast

Gene RIM4, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM4	YHL024W	TOM20	P35180	183 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	SET5	P38890	526 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	YER034W	P40022	185 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	HOP2	P53187	214 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	VTI1	Q04338	217 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	YBL111C	Q3E7Y5	667 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	ESC1	Q03661	1658 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	SSK22	P25390	1331 aa	Predicted RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	RPP2A	P05319	106 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	SFL1	P20134	766 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	MSH1	P25846	959 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	HOG1	P32485	435 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	TOD6	P34219	525 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	NUP120	P35729	1037 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	RFC1	P38630	861 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	RTT105	P40063	208 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	MGS1	P40151	587 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	RSM25	P40496	264 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	MET13	P53128	600 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	PUS2	P53167	370 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	SDA1	P53313	767 aa	Known RBP	4.12	□□□□□ -1.75
RIM4	YHL024W	FMP30	Q02883	468 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	INP2	Q03824	705 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	COG4	Q06096	861 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	TLG2	Q08144	397 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	KCS1	Q12494	1050 aa		4.12	□□□□□ -1.75
RIM4	YHL024W	DIF1	O13577	133 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	NAT1	P12945	854 aa	Known RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	SEN2	P16658	377 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RIM4	YHL024W	MRPS28	P21771	286 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	SED4	P25365	1065 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	LST4	P34239	828 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
RIM4	YHL024W	APL2	P36000	726 aa	Predicted RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	PCM1	P38628	557 aa	Known RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	CRP1	P38845	465 aa	Known RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	PLB1	P39105	664 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	RIC1	P40395	1056 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	NOP15	P53927	220 aa	Predicted RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	SLU7	Q02775	382 aa	Known RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	ENT2	Q05785	613 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	ATG33	Q06485	197 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	RIO1	Q12196	484 aa	Known RBP	4.11	□□□□□ -1.75
RIM4	YHL024W	GDB1	Q06625	1536 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	SWI1	P09547	1314 aa		4.11	□□□□□ -1.75
RIM4	YHL024W	SMY1	P32364	656 aa	Known RBP	4.1	□□□□□ -1.75
RIM4	YHL024W	YHR078W	P38799	552 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	GCD10	P41814	478 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	AIM14	P53109	570 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	ORM1	P53224	222 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	TAP42	Q04372	366 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	NNT1	Q05874	261 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	NPC2	Q12408	173 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	OCA4	P25366	362 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	SEC21	P32074	935 aa	Known RBP	4.1	□□□□□ -1.75
RIM4	YHL024W	PLC1	P32383	869 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	SHR5	P41912	237 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	ZIP2	P53061	704 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	DCP2	P53550	970 aa	Known RBP	4.1	□□□□□ -1.75
RIM4	YHL024W	SVL3	Q03088	825 aa	Known RBP	4.1	□□□□□ -1.75
RIM4	YHL024W	PLP1	Q04004	230 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	NHX1	Q04121	633 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	BUD7	Q08754	746 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	CHS5	Q12114	671 aa	Known RBP	4.1	□□□□□ -1.75
RIM4	YHL024W	GPR1	Q12361	961 aa		4.1	□□□□□ -1.75
RIM4	YHL024W	NUP157	P40064	1391 aa	Known RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	TY1B-DR3	Q99231	1755 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	TUB3	P09734	445 aa	Known RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	HEM1	P09950	548 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	MER1	P16523	270 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	PRP4	P20053	465 aa	Known RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	RPB4	P20433	221 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	GRX4	P32642	244 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	PTR2	P32901	601 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	STU2	P46675	888 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	HLJ1	P48353	224 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	CAF130	P53280	1122 aa	Predicted RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	LSC1	P53598	329 aa	Known RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	BET4	Q00618	327 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	CRR1	Q05790	422 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	IRC3	Q06683	689 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	VAM6	Q07468	1049 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	SLK19	Q08581	821 aa	Known RBP	4.09	□□□□□ -1.75
RIM4	YHL024W	GUP2	Q08929	609 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	YLR149C	Q99296	730 aa		4.09	□□□□□ -1.75
RIM4	YHL024W	SPE2	P21182	396 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	CDC10	P25342	322 aa	Known RBP	4.09	□□□□□ -1.76
RIM4	YHL024W	SIP3	P38717	1229 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	RPN10	P38886	268 aa	Known RBP	4.09	□□□□□ -1.76
RIM4	YHL024W	TMN3	P40071	706 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	PXA1	P41909	870 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	GCD14	P46959	383 aa	Predicted RBP	4.09	□□□□□ -1.76
RIM4	YHL024W	SSY5	P47002	699 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	IML2	P47031	731 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	TMA10	Q06177	86 aa		4.09	□□□□□ -1.76
RIM4	YHL024W	TSR1	Q07381	788 aa	Known RBP	4.09	□□□□□ -1.76
RIM4	YHL024W	THI73	Q07904	523 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms