RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W APE4P38821 490 aa3.8□□□□□ -1.8
SPT6YGR116W PEX18P38855 283 aa3.8□□□□□ -1.8
SPT6YGR116W NPT1P39683 429 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W PEA2P40091 420 aa3.8□□□□□ -1.8
SPT6YGR116W RIC1P40395 1056 aa3.8□□□□□ -1.8
SPT6YGR116W UBP7P40453 1071 aa3.8□□□□□ -1.8
SPT6YGR116W SBE2P42223 864 aaKnown RBP3.8□□□□□ -1.8
SPT6YGR116W FMP32P43557 207 aa3.8□□□□□ -1.8
SPT6YGR116W POL31P46957 487 aa3.8□□□□□ -1.8
SPT6YGR116W JJJ2P46997 583 aa3.8□□□□□ -1.8
SPT6YGR116W PAN2P53010 1115 aaPredicted RBP3.8□□□□□ -1.8
SPT6YGR116W RCF2P53721 224 aa3.8□□□□□ -1.8
SPT6YGR116W TIM8P57744 87 aa3.8□□□□□ -1.8
SPT6YGR116W IVY1Q04934 453 aa3.8□□□□□ -1.8
SPT6YGR116W OXR1Q08952 273 aa3.8□□□□□ -1.8
SPT6YGR116W GPM3Q12326 303 aa3.8□□□□□ -1.8
SPT6YGR116W RRN6P32786 894 aa3.79□□□□□ -1.8
SPT6YGR116W PEX5P35056 612 aa3.79□□□□□ -1.8
SPT6YGR116W YBR259WP38338 688 aa3.79□□□□□ -1.8
SPT6YGR116W SPL2P38839 148 aa3.79□□□□□ -1.8
SPT6YGR116W ICP55P40051 511 aa3.79□□□□□ -1.8
SPT6YGR116W ORC3P54790 616 aa3.79□□□□□ -1.8
SPT6YGR116W UFO1Q04511 668 aa3.79□□□□□ -1.8
SPT6YGR116W RRD2Q12461 358 aa3.79□□□□□ -1.8
SPT6YGR116W POL30P15873 258 aaKnown RBP3.79□□□□□ -1.8
SPT6YGR116W CLN1P20437 546 aa3.79□□□□□ -1.8
SPT6YGR116W TPS2P31688 896 aaKnown RBP3.79□□□□□ -1.8
SPT6YGR116W PCA1P38360 1216 aa3.79□□□□□ -1.8
SPT6YGR116W PIK1P39104 1066 aa3.79□□□□□ -1.8
SPT6YGR116W RTA1P53047 317 aa3.79□□□□□ -1.8
SPT6YGR116W RMR1P53060 241 aa3.79□□□□□ -1.8
SPT6YGR116W NOG1Q02892 647 aaKnown RBP3.79□□□□□ -1.8
SPT6YGR116W ERB1Q04660 807 aaKnown RBP3.79□□□□□ -1.8
SPT6YGR116W MCH5Q08777 521 aa3.79□□□□□ -1.8
SPT6YGR116W TRE1Q08919 783 aa3.79□□□□□ -1.8
SPT6YGR116W SFL1P20134 766 aa3.79□□□□□ -1.8
SPT6YGR116W TRK2P28584 889 aa3.79□□□□□ -1.8
SPT6YGR116W SPR1P32603 445 aa3.79□□□□□ -1.8
SPT6YGR116W YBP1P38315 674 aa3.79□□□□□ -1.8
SPT6YGR116W MSR1P38714 643 aa3.79□□□□□ -1.8
SPT6YGR116W PFK26P40433 827 aaKnown RBP3.79□□□□□ -1.8
SPT6YGR116W SAE2P46946 345 aa3.79□□□□□ -1.8
SPT6YGR116W RAD30Q04049 632 aa3.79□□□□□ -1.8
SPT6YGR116W YMR111CQ04461 462 aaPredicted RBP3.79□□□□□ -1.8
SPT6YGR116W AIM33Q04516 312 aa3.79□□□□□ -1.8
SPT6YGR116W CUR1Q06469 252 aa3.79□□□□□ -1.8
SPT6YGR116W FLO11P08640 1367 aa3.79□□□□□ -1.8
SPT6YGR116W RRT12P25381 491 aa3.79□□□□□ -1.8
SPT6YGR116W ATP7P30902 174 aa3.79□□□□□ -1.8
SPT6YGR116W AFG2P32794 780 aa3.79□□□□□ -1.8
SPT6YGR116W SKG6P32900 734 aaPredicted RBP3.79□□□□□ -1.8
SPT6YGR116W ATG14P38270 344 aa3.79□□□□□ -1.8
SPT6YGR116W SSZ1P38788 538 aaKnown RBP3.79□□□□□ -1.8
SPT6YGR116W YJL206CP39529 758 aa3.79□□□□□ -1.8
SPT6YGR116W YEL023CP39992 682 aa3.79□□□□□ -1.8
SPT6YGR116W PTP3P40048 928 aa3.79□□□□□ -1.8
SPT6YGR116W FMP30Q02883 468 aa3.79□□□□□ -1.8
SPT6YGR116W SSQ1Q05931 657 aaPredicted RBP3.79□□□□□ -1.8
SPT6YGR116W HER1Q12276 1246 aa3.79□□□□□ -1.8
SPT6YGR116W VCX1Q99385 411 aa3.79□□□□□ -1.8
SPT6YGR116W TFB1P32776 642 aa3.78□□□□□ -1.8
SPT6YGR116W WHI3P34761 661 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W ETR1P38071 380 aa3.78□□□□□ -1.8
SPT6YGR116W DUG2P38149 878 aa3.78□□□□□ -1.8
SPT6YGR116W NUT1P53114 1132 aa3.78□□□□□ -1.8
SPT6YGR116W BIO4P53630 237 aa3.78□□□□□ -1.8
SPT6YGR116W OYE2Q03558 400 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W AAD15Q08361 143 aa3.78□□□□□ -1.8
SPT6YGR116W KEL3Q08979 651 aaPredicted RBP3.78□□□□□ -1.8
SPT6YGR116W FAP7Q12055 197 aaPredicted RBP3.78□□□□□ -1.8
SPT6YGR116W NYV1Q12255 253 aa3.78□□□□□ -1.8
SPT6YGR116W TY1B-AO13527 1196 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W MSS116P15424 664 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W AEP2P22136 580 aa3.78□□□□□ -1.8
SPT6YGR116W CAD1P24813 409 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W URA7P28274 579 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W YBL036CP38197 257 aa3.78□□□□□ -1.8
SPT6YGR116W RFS1P38234 210 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W BZZ1P38822 633 aa3.78□□□□□ -1.8
SPT6YGR116W SSP120P39931 234 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W DLD3P39976 496 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W FCY21P40039 528 aa3.78□□□□□ -1.8
SPT6YGR116W BNA3P47039 444 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W RKM4Q12504 494 aa3.78□□□□□ -1.8
SPT6YGR116W HTZ1Q12692 134 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W NHA1Q99271 985 aa3.78□□□□□ -1.8
SPT6YGR116W MF(ALPHA)1P01149 165 aa3.78□□□□□ -1.8
SPT6YGR116W MST1P07236 462 aa3.78□□□□□ -1.8
SPT6YGR116W HEM1P09950 548 aaPredicted RBP3.78□□□□□ -1.8
SPT6YGR116W PAT1P25644 796 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W SEC1P30619 724 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W ABD1P32783 436 aaPredicted RBP3.78□□□□□ -1.8
SPT6YGR116W GYP6P32806 458 aa3.78□□□□□ -1.8
SPT6YGR116W PAM1P37304 830 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W FAA2P39518 744 aa3.78□□□□□ -1.8
SPT6YGR116W RPN3P40016 523 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W YGR273CP53329 174 aa3.78□□□□□ -1.8
SPT6YGR116W CLU1Q03690 1277 aaKnown RBP3.78□□□□□ -1.8
SPT6YGR116W TVP15Q03860 143 aa3.78□□□□□ -1.8
SPT6YGR116W SYF1Q04048 859 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms