RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	NCB2	Q92317	146 aa		4.74	□□□□□ -1.65
MDR1	YGR100W	NUP188	P52593	1655 aa	Known RBP	4.74	□□□□□ -1.65
MDR1	YGR100W	DBF2	P22204	572 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	MRPL32	P25348	183 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	CRM1	P30822	1084 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	VMA8	P32610	256 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	TYE7	P33122	291 aa	Predicted RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	MYO3	P36006	1272 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	UIP5	P36137	443 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YRO2	P38079	344 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YBP1	P38315	674 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YHL008C	P38750	627 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YHR219W	P38900	624 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	MIG2	P53035	382 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	USE1	P53146	245 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	PSR2	Q07949	397 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YOL075C	Q08234	1294 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	BCK1	Q01389	1478 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	RPS17A	P02407	136 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	RPS17B	P14127	136 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	KSS1	P14681	368 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	SPB1	P25582	841 aa	Predicted RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	COQ8	P27697	501 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	PEP3	P27801	918 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	GRX4	P32642	244 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	BLI1	P35727	113 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	BAP2	P38084	609 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YBL028C	P38202	106 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YHR112C	P38716	378 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	SET5	P38890	526 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	HXT6	P39003	570 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	HXT7	P39004	570 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	BNA6	P43619	295 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	POL31	P46957	487 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	NIT3	P49954	291 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	SVL3	Q03088	825 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	MLC2	Q06580	163 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	IRC3	Q06683	689 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	YDL121C	Q07541	149 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	RSC58	Q07979	502 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	NEW1	Q08972	1196 aa	Known RBP	4.73	□□□□□ -1.65
MDR1	YGR100W	YOR111W	Q99210	232 aa		4.73	□□□□□ -1.65
MDR1	YGR100W	RPS3	P05750	240 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	RPT5	P33297	434 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	SAS3	P34218	831 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	NTH2	P35172	780 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	TEF4	P36008	412 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	SSP120	P39931	234 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	SLX8	P40072	274 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	ATG32	P40458	529 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	TAF6	P53040	516 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	DBP6	P53734	629 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	MAK10	Q02197	733 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	SMP3	Q04174	516 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	EMP46	Q12396	444 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	YRF1-2	P40105	1681 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	PMA2	P19657	947 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	MRPL33	P20084	86 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	DIT2	P21595	489 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	RPC53	P25441	422 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	RPS5	P26783	225 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	PTC3	P34221	468 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	UBP11	P36026	717 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	RRF1	P38771	230 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	NOP16	P40007	231 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	INP51	P40559	946 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	RTS2	P40962	232 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	YJL055W	P47044	245 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	LYS4	P49367	693 aa	Predicted RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	DIE2	P50076	525 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	PRO2	P54885	456 aa	Known RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	RGA2	Q06407	1009 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	UBX5	Q06682	500 aa		4.72	□□□□□ -1.65
MDR1	YGR100W	SSF2	Q12153	453 aa	Predicted RBP	4.72	□□□□□ -1.65
MDR1	YGR100W	TUF1	P02992	437 aa	Known RBP	4.71	□□□□□ -1.65
MDR1	YGR100W	MRP7	P12687	371 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	REB1	P21538	810 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	MRM1	P25270	412 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	ZIP1	P31111	875 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	HBS1	P32769	611 aa	Known RBP	4.71	□□□□□ -1.65
MDR1	YGR100W	GLG1	P36143	616 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	TRM5	P38793	499 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	RCY1	P39531	840 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	QRI1	P43123	477 aa	Known RBP	4.71	□□□□□ -1.65
MDR1	YGR100W	RPC17	P47076	161 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	RBG2	P53295	368 aa	Known RBP	4.71	□□□□□ -1.65
MDR1	YGR100W	ASI2	P53895	289 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	GIS4	Q04233	774 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	ATG38	Q05789	226 aa	Known RBP	4.71	□□□□□ -1.65
MDR1	YGR100W	GPI13	Q07830	1017 aa		4.71	□□□□□ -1.65
MDR1	YGR100W	RPN13	O13563	156 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	TUB1	P09733	447 aa	Known RBP	4.71	□□□□□ -1.66
MDR1	YGR100W	GPI10	P30777	616 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	SFA1	P32771	386 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	SSO1	P32867	290 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	SET3	P36124	751 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	GRX7	P38068	203 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	RDH54	P38086	958 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	PPS1	P38148	807 aa		4.71	□□□□□ -1.66
MDR1	YGR100W	YBR138C	P38277	524 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms