RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W UME1Q03010 460 aa1.93□□□□□ -2.1
CUL3YGR003W VHS3Q08438 674 aa1.93□□□□□ -2.1
CUL3YGR003W ULA1Q12059 462 aa1.93□□□□□ -2.1
CUL3YGR003W ATP12P22135 325 aa1.92□□□□□ -2.1
CUL3YGR003W YMC2P38087 329 aa1.92□□□□□ -2.1
CUL3YGR003W CDS1P38221 457 aa1.92□□□□□ -2.1
CUL3YGR003W TDA3P38758 523 aa1.92□□□□□ -2.1
CUL3YGR003W LSC1P53598 329 aaKnown RBP1.92□□□□□ -2.1
CUL3YGR003W TIM50Q02776 476 aa1.92□□□□□ -2.1
CUL3YGR003W MTC7P32633 139 aa1.91□□□□□ -2.1
CUL3YGR003W OAF3P36023 863 aa1.91□□□□□ -2.1
CUL3YGR003W APT2P36973 181 aa1.91□□□□□ -2.1
CUL3YGR003W MIT1P40002 666 aa1.91□□□□□ -2.1
CUL3YGR003W KHA1P40309 873 aa1.91□□□□□ -2.1
CUL3YGR003W IES1P43579 692 aa1.91□□□□□ -2.1
CUL3YGR003W MPS3P47069 682 aa1.91□□□□□ -2.1
CUL3YGR003W YGR153WP48238 217 aa1.91□□□□□ -2.1
CUL3YGR003W YGR237CP50089 785 aa1.91□□□□□ -2.1
CUL3YGR003W SCW4P53334 386 aaKnown RBP1.91□□□□□ -2.1
CUL3YGR003W SNF12P53628 566 aa1.91□□□□□ -2.1
CUL3YGR003W NOP15P53927 220 aaPredicted RBP1.91□□□□□ -2.1
CUL3YGR003W SCW10Q04951 389 aa1.91□□□□□ -2.1
CUL3YGR003W CHS5Q12114 671 aaKnown RBP1.91□□□□□ -2.1
CUL3YGR003W POM34Q12445 299 aa1.91□□□□□ -2.1
CUL3YGR003W NUP145P49687 1317 aa1.91□□□□□ -2.1
CUL3YGR003W TUP1P16649 713 aa1.91□□□□□ -2.1
CUL3YGR003W SEC65P29478 273 aa1.91□□□□□ -2.1
CUL3YGR003W COS111P38308 924 aa1.91□□□□□ -2.1
CUL3YGR003W KSP1P38691 1029 aaKnown RBP1.91□□□□□ -2.1
CUL3YGR003W CRG1P38892 291 aaRIP-Chip data1.91□□□□□ -2.1not detected
CUL3YGR003W UBP12P39538 1254 aa1.91□□□□□ -2.1
CUL3YGR003W NMA2P53204 395 aa1.91□□□□□ -2.1
CUL3YGR003W YGR151CP53287 111 aa1.91□□□□□ -2.1
CUL3YGR003W YFT2Q06676 274 aa1.91□□□□□ -2.1
CUL3YGR003W HFI1Q12060 488 aa1.91□□□□□ -2.1
CUL3YGR003W RPS17AP02407 136 aaKnown RBP1.9□□□□□ -2.1
CUL3YGR003W RPS17BP14127 136 aaKnown RBP1.9□□□□□ -2.1
CUL3YGR003W PRE4P30657 266 aa1.9□□□□□ -2.1
CUL3YGR003W PET127P32606 800 aa1.9□□□□□ -2.1
CUL3YGR003W ENP1P38333 483 aaKnown RBP1.9□□□□□ -2.1
CUL3YGR003W GZF3P42944 551 aaKnown RBP1.9□□□□□ -2.1
CUL3YGR003W YJR120WP47157 116 aa1.9□□□□□ -2.1
CUL3YGR003W YMR210WQ03649 449 aa1.9□□□□□ -2.1
CUL3YGR003W YGR161W-CQ3E744 92 aa1.9□□□□□ -2.1
CUL3YGR003W YOR111WQ99210 232 aa1.9□□□□□ -2.1
CUL3YGR003W LAM4P38800 1345 aa1.9□□□□□ -2.11
CUL3YGR003W PHO5P00635 467 aa1.9□□□□□ -2.11
CUL3YGR003W GRX4P32642 244 aa1.9□□□□□ -2.11
CUL3YGR003W ELF1P36053 145 aa1.9□□□□□ -2.11
CUL3YGR003W EHT1P38295 451 aa1.9□□□□□ -2.11
CUL3YGR003W VID28P40547 921 aa1.9□□□□□ -2.11
CUL3YGR003W YDL183CP48569 320 aa1.9□□□□□ -2.11
CUL3YGR003W ASN1P49089 572 aaKnown RBP1.9□□□□□ -2.11
CUL3YGR003W DOS2P54858 310 aa1.9□□□□□ -2.11
CUL3YGR003W GPD1Q00055 391 aaKnown RBP1.9□□□□□ -2.11
CUL3YGR003W YHM2Q04013 314 aa1.9□□□□□ -2.11
CUL3YGR003W IZH3Q07959 543 aa1.9□□□□□ -2.11
CUL3YGR003W BRN1P38170 754 aa1.89□□□□□ -2.11
CUL3YGR003W SLX1P38324 304 aa1.89□□□□□ -2.11
CUL3YGR003W SPC97P38863 823 aa1.89□□□□□ -2.11
CUL3YGR003W YEN1P40028 759 aa1.89□□□□□ -2.11
CUL3YGR003W FTR1P40088 404 aa1.89□□□□□ -2.11
CUL3YGR003W MNN11P46985 422 aaKnown RBP1.89□□□□□ -2.11
CUL3YGR003W PMT3P47190 753 aa1.89□□□□□ -2.11
CUL3YGR003W ENP2P48234 707 aaKnown RBP1.89□□□□□ -2.11
CUL3YGR003W UTP14Q04500 899 aaKnown RBP1.89□□□□□ -2.11
CUL3YGR003W YTM1Q12024 460 aaPredicted RBP1.89□□□□□ -2.11
CUL3YGR003W CLF1Q12309 687 aaPredicted RBP1.89□□□□□ -2.11
CUL3YGR003W ERG20P08524 352 aaKnown RBP1.89□□□□□ -2.11
CUL3YGR003W PRP28P23394 588 aa1.89□□□□□ -2.11
CUL3YGR003W MF(ALPHA)2P32435 120 aa1.89□□□□□ -2.11
CUL3YGR003W HXT4P32467 576 aa1.89□□□□□ -2.11
CUL3YGR003W CTP1P38152 299 aa1.89□□□□□ -2.11
CUL3YGR003W FPR3P38911 411 aaKnown RBP1.89□□□□□ -2.11
CUL3YGR003W GPP2P40106 250 aaKnown RBP1.89□□□□□ -2.11
CUL3YGR003W PIG2P40187 538 aa1.89□□□□□ -2.11
CUL3YGR003W DIP5P53388 608 aa1.89□□□□□ -2.11
CUL3YGR003W IRC3Q06683 689 aa1.89□□□□□ -2.11
CUL3YGR003W YDL086WQ07505 273 aa1.89□□□□□ -2.11
CUL3YGR003W NDD1Q08887 554 aa1.89□□□□□ -2.11
CUL3YGR003W FAP7Q12055 197 aaPredicted RBP1.89□□□□□ -2.11
CUL3YGR003W APM4Q99186 491 aa1.89□□□□□ -2.11
CUL3YGR003W YKR075CP36155 307 aa1.88□□□□□ -2.11
CUL3YGR003W YAT2P40017 923 aa1.88□□□□□ -2.11
CUL3YGR003W TMN3P40071 706 aa1.88□□□□□ -2.11
CUL3YGR003W NUP53Q03790 475 aa1.88□□□□□ -2.11
CUL3YGR003W VBA4Q04602 768 aaKnown RBP1.88□□□□□ -2.11
CUL3YGR003W DIA2Q08496 732 aaPredicted RBP1.88□□□□□ -2.11
CUL3YGR003W RKI1Q12189 258 aa1.88□□□□□ -2.11
CUL3YGR003W AI5_ALPHAQ9ZZX1 630 aa1.88□□□□□ -2.11
CUL3YGR003W LEU2P04173 364 aaPredicted RBP1.87□□□□□ -2.11
CUL3YGR003W RPS9BP05755 195 aaKnown RBP1.87□□□□□ -2.11
CUL3YGR003W BEM3P32873 1128 aa1.87□□□□□ -2.11
CUL3YGR003W ASK1P35734 292 aa1.87□□□□□ -2.11
CUL3YGR003W MRPL7P36519 292 aa1.87□□□□□ -2.11
CUL3YGR003W MET30P39014 640 aa1.87□□□□□ -2.11
CUL3YGR003W PCI8P40512 444 aa1.87□□□□□ -2.11
CUL3YGR003W TAF4P50105 388 aa1.87□□□□□ -2.11
CUL3YGR003W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
CUL3YGR003W KIN82P25341 720 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms