RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W RTK1Q12100 620 aaPredicted RBP1.59□□□□□ -2.16
SMC1YFL008W YBR259WP38338 688 aa1.59□□□□□ -2.16
SMC1YFL008W RSC8P43609 557 aaKnown RBP1.59□□□□□ -2.16
SMC1YFL008W YNL018CP53976 612 aa1.59□□□□□ -2.16
SMC1YFL008W THI73Q07904 523 aa1.59□□□□□ -2.16
SMC1YFL008W GIN4Q12263 1142 aa1.59□□□□□ -2.16
SMC1YFL008W PHO5P00635 467 aa1.58□□□□□ -2.16
SMC1YFL008W MBR1P23493 339 aa1.58□□□□□ -2.16
SMC1YFL008W FTR1P40088 404 aa1.58□□□□□ -2.16
SMC1YFL008W BST1P43571 1029 aa1.58□□□□□ -2.16
SMC1YFL008W TEL2P53038 688 aa1.58□□□□□ -2.16
SMC1YFL008W SGO1Q08490 590 aa1.58□□□□□ -2.16
SMC1YFL008W BNR1P40450 1375 aa1.58□□□□□ -2.16
SMC1YFL008W GLN4P13188 809 aaKnown RBP1.58□□□□□ -2.16
SMC1YFL008W HSL7P38274 827 aa1.58□□□□□ -2.16
SMC1YFL008W CKB2P38930 258 aa1.58□□□□□ -2.16
SMC1YFL008W ATG36P46983 293 aa1.58□□□□□ -2.16
SMC1YFL008W AMA1P50082 593 aa1.58□□□□□ -2.16
SMC1YFL008W VPS73P53142 486 aaKnown RBP1.58□□□□□ -2.16
SMC1YFL008W GND2P53319 492 aa1.58□□□□□ -2.16
SMC1YFL008W CIA1Q05583 330 aa1.58□□□□□ -2.16
SMC1YFL008W YPR196WQ06595 470 aa1.58□□□□□ -2.16
SMC1YFL008W YOR352WQ08816 343 aa1.58□□□□□ -2.16
SMC1YFL008W MRH1Q12117 320 aaPredicted RBP1.58□□□□□ -2.16
SMC1YFL008W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SMC1YFL008W THI4P32318 326 aa1.58□□□□□ -2.16
SMC1YFL008W EUG1P32474 517 aa1.58□□□□□ -2.16
SMC1YFL008W YHR097CP38809 366 aaKnown RBP1.58□□□□□ -2.16
SMC1YFL008W YHR202WP38887 602 aa1.58□□□□□ -2.16
SMC1YFL008W UBP7P40453 1071 aa1.58□□□□□ -2.16
SMC1YFL008W KRI1P42846 591 aaKnown RBP1.58□□□□□ -2.16
SMC1YFL008W JSN1P47135 1091 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SMC1YFL008W RFX1P48743 811 aa1.58□□□□□ -2.16
SMC1YFL008W YDR514CQ04408 483 aa1.58□□□□□ -2.16
SMC1YFL008W ARG7Q04728 441 aa1.58□□□□□ -2.16
SMC1YFL008W IRC10Q08118 586 aa1.58□□□□□ -2.16
SMC1YFL008W PNS1Q12412 539 aa1.58□□□□□ -2.16
SMC1YFL008W CCT3P39077 534 aaKnown RBP1.57□□□□□ -2.16
SMC1YFL008W YIR042CP40586 236 aa1.57□□□□□ -2.16
SMC1YFL008W RET2P43621 546 aa1.57□□□□□ -2.16
SMC1YFL008W PRP31P49704 494 aaPredicted RBP1.57□□□□□ -2.16
SMC1YFL008W CEG1Q01159 459 aaPredicted RBP1.57□□□□□ -2.16
SMC1YFL008W YKL033W-AQ86ZR7 236 aa1.57□□□□□ -2.16
SMC1YFL008W MAK32P23060 363 aa1.57□□□□□ -2.16
SMC1YFL008W HEM12P32347 362 aaPredicted RBP1.57□□□□□ -2.16
SMC1YFL008W SCT1P32784 759 aa1.57□□□□□ -2.16
SMC1YFL008W SUL1P38359 859 aa1.57□□□□□ -2.16
SMC1YFL008W PSP2P50109 593 aaKnown RBP1.57□□□□□ -2.16
SMC1YFL008W YFT2Q06676 274 aa1.57□□□□□ -2.16
SMC1YFL008W PRC1P00729 532 aa1.56□□□□□ -2.16
SMC1YFL008W FEN2P25621 512 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W YJU2P28320 278 aaPredicted RBP1.56□□□□□ -2.16
SMC1YFL008W RMA1P36001 430 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W GZF3P42944 551 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W YGL117WP53133 265 aa1.56□□□□□ -2.16
SMC1YFL008W TIM50Q02776 476 aa1.56□□□□□ -2.16
SMC1YFL008W DLT1Q04216 342 aa1.56□□□□□ -2.16
SMC1YFL008W EIS1Q05050 843 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W RPN7Q06103 429 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W FRE7Q12333 620 aa1.56□□□□□ -2.16
SMC1YFL008W ECM3Q99252 613 aa1.56□□□□□ -2.16
SMC1YFL008W GSC2P40989 1895 aa1.56□□□□□ -2.16
SMC1YFL008W YBR071WP38243 211 aa1.56□□□□□ -2.16
SMC1YFL008W ALY2P47029 1046 aa1.56□□□□□ -2.16
SMC1YFL008W FOL2P51601 243 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W PEF1P53238 335 aa1.56□□□□□ -2.16
SMC1YFL008W DIF1O13577 133 aa1.56□□□□□ -2.16
SMC1YFL008W PIF1P07271 859 aa1.56□□□□□ -2.16
SMC1YFL008W HOP1P20050 605 aa1.56□□□□□ -2.16
SMC1YFL008W FRD1P32614 470 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W MRPL7P36519 292 aa1.56□□□□□ -2.16
SMC1YFL008W YHL017WP38745 532 aa1.56□□□□□ -2.16
SMC1YFL008W RPT2P40327 437 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W MNN11P46985 422 aaKnown RBP1.56□□□□□ -2.16
SMC1YFL008W CIR2Q08822 631 aa1.56□□□□□ -2.16
SMC1YFL008W RPS9BP05755 195 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W CAF20P12962 161 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W FRS1P15624 595 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W ADY2P25613 283 aa1.55□□□□□ -2.16
SMC1YFL008W PET127P32606 800 aa1.55□□□□□ -2.16
SMC1YFL008W EHT1P38295 451 aa1.55□□□□□ -2.16
SMC1YFL008W MNT2P53059 558 aa1.55□□□□□ -2.16
SMC1YFL008W SWM1Q12379 170 aa1.55□□□□□ -2.16
SMC1YFL008W DYN1P36022 4092 aa1.55□□□□□ -2.16
SMC1YFL008W TUP1P16649 713 aa1.55□□□□□ -2.16
SMC1YFL008W PLC1P32383 869 aa1.55□□□□□ -2.16
SMC1YFL008W HXT4P32467 576 aa1.55□□□□□ -2.16
SMC1YFL008W TYS1P36421 394 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W SFB3P38810 929 aa1.55□□□□□ -2.16
SMC1YFL008W CRP1P38845 465 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W PAC2P39937 518 aa1.55□□□□□ -2.16
SMC1YFL008W LRO1P40345 661 aa1.55□□□□□ -2.16
SMC1YFL008W NIT3P49954 291 aa1.55□□□□□ -2.16
SMC1YFL008W OSW1Q08692 278 aa1.55□□□□□ -2.16
SMC1YFL008W RFA1P22336 621 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W YMC1P32331 307 aa1.55□□□□□ -2.16
SMC1YFL008W ECM32P32644 1121 aaKnown RBP1.55□□□□□ -2.16
SMC1YFL008W CTP1P38152 299 aa1.55□□□□□ -2.16
SMC1YFL008W PRM2P40534 656 aa1.55□□□□□ -2.16
SMC1YFL008W TDA10P42938 290 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms