RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	NTR2	P36118	322 aa	Predicted RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	SET3	P36124	751 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	PDX3	P38075	228 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	YBR138C	P38277	524 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	PFK26	P40433	827 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	SDS3	P40505	327 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	EMC2	P47133	292 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	PEX21	P50091	288 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	NMA2	P53204	395 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	SED5	Q01590	340 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	SSQ1	Q05931	657 aa	Predicted RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	YPR172W	Q06608	200 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	DIA2	Q08496	732 aa	Predicted RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	ATG29	Q12092	213 aa		5.62	□□□□□ -1.51
VTC2	YFL004W	LSO2	Q3E772	92 aa	Known RBP	5.62	□□□□□ -1.51
VTC2	YFL004W	RPL6B	P05739	176 aa	Known RBP	5.61	□□□□□ -1.51
VTC2	YFL004W	CBF1	P17106	351 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	APL2	P36000	726 aa	Predicted RBP	5.61	□□□□□ -1.51
VTC2	YFL004W	MNN2	P38069	597 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	MAL31	P38156	614 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	GIP1	P38229	639 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	SLI15	P38283	698 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	YBP1	P38315	674 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	VHC1	P38329	1120 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	SAH1	P39954	449 aa	Known RBP	5.61	□□□□□ -1.51
VTC2	YFL004W	PRK1	P40494	810 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	SER33	P40510	469 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	IRC5	P43610	853 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	RBG2	P53295	368 aa	Known RBP	5.61	□□□□□ -1.51
VTC2	YFL004W	CNM67	P53865	581 aa	Known RBP	5.61	□□□□□ -1.51
VTC2	YFL004W	URC2	Q04411	772 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	RGC1	Q06108	1083 aa	Known RBP	5.61	□□□□□ -1.51
VTC2	YFL004W	VHS3	Q08438	674 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	YPR202W	Q08993	238 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	NCR1	Q12200	1170 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	APM4	Q99186	491 aa		5.61	□□□□□ -1.51
VTC2	YFL004W	TRP2	P00899	507 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	THS1	P04801	734 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	CHO2	P05374	869 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	HMG1	P12683	1054 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	ARG8	P18544	423 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	COQ1	P18900	473 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
VTC2	YFL004W	PEX5	P35056	612 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	TRZ1	P36159	838 aa	Predicted RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	MSG5	P38590	489 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	SPC97	P38863	823 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	END3	P39013	349 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	GDH3	P39708	457 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	STL1	P39932	569 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	ULP2	P40537	1034 aa	Predicted RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	PAC11	P40960	533 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	GCD10	P41814	478 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	THI6	P41835	540 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	TOS3	P43637	560 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	YGR153W	P48238	217 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	RMR1	P53060	241 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	CWC25	P53854	179 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	BUD22	Q04347	519 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	SNU66	Q12420	587 aa	Predicted RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	NOT5	Q12514	560 aa	Predicted RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	MF(ALPHA)1	P01149	165 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	COR1	P07256	457 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	PDC5	P16467	563 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	STF2	P16965	84 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.6	□□□□□ -1.51	not detected
VTC2	YFL004W	TGL4	P36165	910 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	ETR1	P38071	380 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	KAP104	P38217	918 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	BOL3	P39724	118 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	RPH1	P39956	796 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	LIA1	P47120	325 aa	Known RBP	5.6	□□□□□ -1.51
VTC2	YFL004W	YNL115C	P53925	644 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	ORC3	P54790	616 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	PKH1	Q03407	766 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	YDR278C	Q05612	105 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	PEX15	Q08215	383 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	GYP1	Q08484	637 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	ATG11	Q12527	1178 aa		5.6	□□□□□ -1.51
VTC2	YFL004W	MET6	P05694	767 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	GCR1	P07261	785 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	MIP1	P15801	1254 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	PAT1	P25644	796 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	RAD14	P28519	371 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	MGM1	P32266	881 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	SUV3	P32580	737 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	VMA8	P32610	256 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	TFB1	P32776	642 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	SIP2	P34164	415 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	CLG1	P35190	452 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	YHL012W	P38709	493 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	GOS1	P38736	223 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	CCT6	P39079	546 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	PHB1	P40961	287 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	SBE2	P42223	864 aa	Known RBP	5.59	□□□□□ -1.51
VTC2	YFL004W	MET12	P46151	657 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	IRC8	P47046	822 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	SNX4	P47057	423 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	YGL138C	P53122	345 aa		5.59	□□□□□ -1.51
VTC2	YFL004W	GLO2	Q05584	274 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms