RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	AIM32	Q04689	311 aa		13.32	□□□□□ -0.28
NPL3	YDR432W	ARP7	Q12406	477 aa		13.32	□□□□□ -0.28
NPL3	YDR432W	MSH3	P25336	1018 aa		13.31	□□□□□ -0.28
NPL3	YDR432W	GUT1	P32190	709 aa		13.31	□□□□□ -0.28
NPL3	YDR432W	MIC60	P36112	540 aa		13.31	□□□□□ -0.28
NPL3	YDR432W	SHM1	P37292	490 aa	Predicted RBP	13.31	□□□□□ -0.28
NPL3	YDR432W	KTR4	P38131	464 aa		13.31	□□□□□ -0.28
NPL3	YDR432W	PPX1	P38698	397 aa		13.31	□□□□□ -0.28
NPL3	YDR432W	PRK1	P40494	810 aa		13.31	□□□□□ -0.28
NPL3	YDR432W	JIP5	Q06214	492 aa	Predicted RBP	13.31	□□□□□ -0.28
NPL3	YDR432W	RPS6A	P0CX37	236 aa	Known RBP	13.3	□□□□□ -0.28
NPL3	YDR432W	RPS6B	P0CX38	236 aa	Predicted RBP	13.3	□□□□□ -0.28
NPL3	YDR432W	SEC65	P29478	273 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	MIP6	P38760	659 aa	Known RBP	13.3	□□□□□ -0.28
NPL3	YDR432W	YEL075C	P39972	122 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	TFG2	P41896	400 aa	Predicted RBP	13.3	□□□□□ -0.28
NPL3	YDR432W	YJR079W	P47126	109 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	DAN4	P47179	1161 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	FLC3	P53121	802 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	PUS2	P53167	370 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	PIN2	Q12057	282 aa		13.3	□□□□□ -0.28
NPL3	YDR432W	NIP100	P33420	868 aa		13.29	□□□□□ -0.28
NPL3	YDR432W	GIP4	P39732	760 aa		13.29	□□□□□ -0.28
NPL3	YDR432W	STU2	P46675	888 aa		13.29	□□□□□ -0.28
NPL3	YDR432W	TDA7	P53882	636 aa	Predicted RBP	13.29	□□□□□ -0.28
NPL3	YDR432W	YPR078C	Q06813	372 aa		13.29	□□□□□ -0.28
NPL3	YDR432W	CLP1	Q08685	445 aa	Predicted RBP	13.29	□□□□□ -0.28
NPL3	YDR432W	CWC2	Q12046	339 aa	Predicted RBP	13.29	□□□□□ -0.28
NPL3	YDR432W	YOL098C	Q12496	1037 aa		13.29	□□□□□ -0.28
NPL3	YDR432W	MSF1	P08425	469 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	STE13	P33894	931 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	TRZ1	P36159	838 aa	Predicted RBP	13.28	□□□□□ -0.28
NPL3	YDR432W	RTT101	P47050	842 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	YMR206W	Q03695	313 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	GYL1	Q04322	720 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	YPR148C	Q06523	435 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	SIL1	Q08199	421 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	SPO21	Q12411	609 aa		13.28	□□□□□ -0.28
NPL3	YDR432W	SAP190	P36123	1033 aa		13.27	□□□□□ -0.29
NPL3	YDR432W	CBR1	P38626	284 aa	Known RBP	13.27	□□□□□ -0.29
NPL3	YDR432W	QNS1	P38795	714 aa	Known RBP	13.27	□□□□□ -0.29
NPL3	YDR432W	PIK1	P39104	1066 aa		13.27	□□□□□ -0.29
NPL3	YDR432W	UBP7	P40453	1071 aa		13.27	□□□□□ -0.29
NPL3	YDR432W	PYK2	P52489	506 aa	Known RBP	13.27	□□□□□ -0.29
NPL3	YDR432W	CLU1	Q03690	1277 aa	Known RBP	13.27	□□□□□ -0.29
NPL3	YDR432W	HMI1	Q12039	706 aa		13.27	□□□□□ -0.29
NPL3	YDR432W	BI4	P03879	638 aa		13.26	□□□□□ -0.29
NPL3	YDR432W	CAP1	P28495	268 aa	Known RBP	13.26	□□□□□ -0.29
NPL3	YDR432W	MCM2	P29469	868 aa		13.26	□□□□□ -0.29
NPL3	YDR432W	PXL1	P36166	706 aa		13.26	□□□□□ -0.29
NPL3	YDR432W	RTT107	P38850	1070 aa		13.26	□□□□□ -0.29
NPL3	YDR432W	YSH1	Q06224	779 aa	Predicted RBP	13.26	□□□□□ -0.29
NPL3	YDR432W	THI20	Q08224	551 aa		13.26	□□□□□ -0.29
NPL3	YDR432W	EMP46	Q12396	444 aa		13.26	□□□□□ -0.29
NPL3	YDR432W	CYC8	P14922	966 aa		13.25	□□□□□ -0.29
NPL3	YDR432W	SEC6	P32844	805 aa		13.25	□□□□□ -0.29
NPL3	YDR432W	MPE1	P35728	441 aa	Known RBP	13.25	□□□□□ -0.29
NPL3	YDR432W	EXO1	P39875	702 aa		13.25	□□□□□ -0.29
NPL3	YDR432W	MRX6	P48564	524 aa		13.25	□□□□□ -0.29
NPL3	YDR432W	VEL1	P53058	206 aa		13.25	□□□□□ -0.29
NPL3	YDR432W	VMA4	P22203	233 aa	Known RBP	13.24	□□□□□ -0.29
NPL3	YDR432W	YIH1	P25637	258 aa		13.24	□□□□□ -0.29
NPL3	YDR432W	SMC1	P32908	1225 aa		13.24	□□□□□ -0.29
NPL3	YDR432W	SRB2	P34162	210 aa		13.24	□□□□□ -0.29
NPL3	YDR432W	CRP1	P38845	465 aa	Known RBP	13.24	□□□□□ -0.29
NPL3	YDR432W	PRP24	P49960	444 aa	Known RBP	13.24	□□□□□ -0.29
NPL3	YDR432W	VPS75	P53853	264 aa		13.24	□□□□□ -0.29
NPL3	YDR432W	YNL144C	P53907	740 aa		13.24	□□□□□ -0.29
NPL3	YDR432W	PUT4	P15380	627 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	ARF2	P19146	181 aa	Known RBP	13.23	□□□□□ -0.29
NPL3	YDR432W	GYP6	P32806	458 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	HSL7	P38274	827 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	FAA3	P39002	694 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	BST1	P43571	1029 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	SMA1	Q02651	245 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	AIM39	Q08223	395 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	CIR2	Q08822	631 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	NDD1	Q08887	554 aa		13.23	□□□□□ -0.29
NPL3	YDR432W	MET22	P32179	357 aa		13.22	□□□□□ -0.29
NPL3	YDR432W	YJR061W	P40355	935 aa		13.22	□□□□□ -0.29
NPL3	YDR432W	SNZ3	P43545	298 aa		13.22	□□□□□ -0.29
NPL3	YDR432W	STR2	P47164	639 aa		13.22	□□□□□ -0.29
NPL3	YDR432W	SNZ2	P53824	298 aa		13.22	□□□□□ -0.29
NPL3	YDR432W	YLR012C	Q07927	99 aa		13.22	□□□□□ -0.29
NPL3	YDR432W	PHO13	P19881	312 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	CCR4	P31384	837 aa	Known RBP	13.21	□□□□□ -0.29
NPL3	YDR432W	HXT8	P40886	569 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	PEX13	P80667	386 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	EAF1	Q06337	982 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	YDL129W	Q07555	291 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	AAD4	Q07747	329 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	STB3	Q12427	513 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	VPS5	Q92331	675 aa		13.21	□□□□□ -0.29
NPL3	YDR432W	BI2	P03873	423 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
NPL3	YDR432W	PYC1	P11154	1178 aa	Known RBP	13.2	□□□□□ -0.3
NPL3	YDR432W	PYC2	P32327	1180 aa	Known RBP	13.2	□□□□□ -0.3
NPL3	YDR432W	TFB1	P32776	642 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	ABD1	P32783	436 aa	Predicted RBP	13.2	□□□□□ -0.3
NPL3	YDR432W	EXO5	P38289	585 aa		13.2	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms