RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeast

Gene NOP6, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NOP6	YDL213C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
NOP6	YDL213C	BET2	P20133	325 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	SIR1	P21691	654 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	LCB1	P25045	558 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	SRO9	P25567	434 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	GPI10	P30777	616 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	IME2	P32581	645 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	UIP5	P36137	443 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	ESL2	P36168	1195 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	YBR138C	P38277	524 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	QNS1	P38795	714 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	RPN3	P40016	523 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	RTT105	P40063	208 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	PCL7	P40186	285 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	LTP1	P40347	161 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	LEM3	P42838	414 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	YJR039W	P47107	1121 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	ENP2	P48234	707 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	PSP2	P50109	593 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	PIL1	P53252	339 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	HST1	P53685	503 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	VPS75	P53853	264 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	SFB2	P53953	876 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	RPT6	Q01939	405 aa	Known RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	ARP9	Q05123	467 aa		4.22	□□□□□ -1.73
NOP6	YDL213C	IWR1	Q07532	353 aa	Predicted RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	RRP36	Q12481	300 aa	Predicted RBP	4.22	□□□□□ -1.73
NOP6	YDL213C	TUF1	P02992	437 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	CPA2	P03965	1118 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	RPL19A	P0CX82	189 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	RPL19B	P0CX83	189 aa	Predicted RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	POL3	P15436	1097 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	PRP22	P24384	1145 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	STE50	P25344	346 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	REI1	P38344	393 aa	Predicted RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	VPS41	P38959	992 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	BEM4	P39011	633 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	TIF4631	P39935	952 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	YEL025C	P39991	1188 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	SPO22	P40511	975 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	NEO1	P40527	1151 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	YFL052W	P43551	465 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	FYV8	P46949	817 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	YJL055W	P47044	245 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	MDE1	P47095	244 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	PSP1	P50896	841 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	DUO1	P53168	247 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	YNR061C	P53747	219 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	LRS4	Q04087	347 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	YMR111C	Q04461	462 aa	Predicted RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	YDL073W	Q07454	984 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	MLH2	Q07980	695 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	APL4	Q12028	832 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	NFI1	Q12216	726 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	PDH1	Q12428	516 aa	Known RBP	4.21	□□□□□ -1.74
NOP6	YDL213C	NSI1	Q12457	570 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	SKM1	Q12469	655 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	PCD1	Q12524	340 aa		4.21	□□□□□ -1.74
NOP6	YDL213C	SEC53	P07283	254 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	YEL076C-A	P0CX16	216 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	YLR464W	P0CX17	216 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	HSF1	P10961	833 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	GLN4	P13188	809 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	PWP1	P21304	576 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	APN1	P22936	367 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	OCA4	P25366	362 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	YCL002C	P25565	263 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	ADK2	P26364	225 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	DGR2	P32330	852 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	MF(ALPHA)2	P32435	120 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	RIB7	P33312	244 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	CTF13	P35203	478 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	YKR075C	P36155	307 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	RFC1	P38630	861 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	GIC1	P38785	314 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	SSZ1	P38788	538 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	SET5	P38890	526 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	YEL076C	P39971	216 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	NPP2	P39997	493 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	YJR061W	P40355	935 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	SHR5	P41912	237 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	CIT3	P43635	486 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	ARC1	P46672	376 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	SIP4	P46954	829 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	FOL2	P51601	243 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	IMA1	P53051	589 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	ELA1	P53861	379 aa	Predicted RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	NOP15	P53927	220 aa	Predicted RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	RAD33	Q04231	177 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	RNH1	Q04740	348 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	TRI1	Q05024	226 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	RSA3	Q05942	220 aa	Known RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	APC5	Q08683	685 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NOP6	YDL213C	RTK1	Q12100	620 aa	Predicted RBP	4.2	□□□□□ -1.74
NOP6	YDL213C	SKS1	Q12505	502 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	YLR149C	Q99296	730 aa		4.2	□□□□□ -1.74
NOP6	YDL213C	RRP7	P25368	297 aa	Predicted RBP	4.19	□□□□□ -1.74
NOP6	YDL213C	SPB1	P25582	841 aa	Predicted RBP	4.19	□□□□□ -1.74
NOP6	YDL213C	RPC82	P32349	654 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 116 ms